INfrastructure for a PHAge REference database: identification of large-scale biases in the current collection of cultured phage genomes R Cook, N Brown, T Redgwell, B Rihtman, M Barnes, M Clokie, DJ Stekel, ... Phage 2 (4), 214-223, 2021 | 153 | 2021 |
Hybrid assembly of an agricultural slurry virome reveals a diverse and stable community with the potential to alter the metabolism and virulence of veterinary pathogens R Cook, S Hooton, U Trivedi, L King, CER Dodd, JL Hobman, DJ Stekel, ... Microbiome 9, 1-17, 2021 | 40 | 2021 |
A new family of “megaphages” abundant in the marine environment S Michniewski, B Rihtman, R Cook, MA Jones, WH Wilson, DJ Scanlan, ... ISME communications 1 (1), 58, 2021 | 16 | 2021 |
Antimicrobial resistance in dairy slurry tanks: A critical point for measurement and control B Michelle, AD Williams, S Hooton, R Helliwell, E King, T Dodsworth, ... | 7 | 2022 |
The long and short of it: benchmarking viromics using Illumina, Nanopore and PacBio sequencing technologies R Cook, N Brown, B Rihtman, S Michniewski, T Redgwell, M Clokie, ... Microbial Genomics 10 (2), 001198, 2024 | 6 | 2024 |
Viral metagenomics reveals diverse virus-host interactions throughout the soil depth profile G Muscatt, R Cook, A Millard, GD Bending, E Jameson Mbio 14 (6), e02246-23, 2023 | 5* | 2023 |
Decoding Huge Phage Diversity: A Taxonomic Classification of Lak Megaphages R Cook, MA Crisci, HV Pye, A Telatin, EM Adriaenssens, JM Santini bioRxiv, 2024.02. 01.578382, 2024 | | 2024 |
Predicting stop codon reassignment improves functional annotation of bacteriophages R Cook, A Telatin, G Bouras, AP Camargo, M Larralde, RA Edwards, ... bioRxiv, 2023.12. 19.572299, 2023 | | 2023 |
Nanopore and Illumina Sequencing Reveal Different Viral Populations from Human Gut Samples R Cook, A Telatin, SY Hsieh, F Newberry, MA Tariq, DJ Baker, ... bioRxiv, 2023.11. 24.568560, 2023 | | 2023 |
Complete Genome Sequence of Pseudomonas aeruginosa Bacteriophage vB_PaeP_PaCe R Cook, T Darby, DR Roach Microbiology Resource Announcements 11 (8), e00463-22, 2022 | | 2022 |