Damiano Piovesan
Damiano Piovesan
Verified email at unipd.it
Title
Cited by
Cited by
Year
InterPro in 2017—beyond protein family and domain annotations
RD Finn, TK Attwood, PC Babbitt, A Bateman, P Bork, AJ Bridge, ...
Nucleic acids research 45 (D1), D190-D199, 2017
9582017
The Pfam protein families database in 2019
S El-Gebali, J Mistry, A Bateman, SR Eddy, A Luciani, SC Potter, ...
Nucleic acids research 47 (D1), D427-D432, 2019
8202019
A large-scale evaluation of computational protein function prediction
P Radivojac, WT Clark, TR Oron, AM Schnoes, T Wittkop, A Sokolov, ...
Nature methods 10 (3), 221-227, 2013
6782013
An expanded evaluation of protein function prediction methods shows an improvement in accuracy
Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ...
Genome biology 17 (1), 184, 2016
2252016
DisProt 7.0: a major update of the database of disordered proteins
D Piovesan, F Tabaro, I Mičetić, M Necci, F Quaglia, CJ Oldfield, ...
Nucleic acids research 45 (D1), D219-D227, 2017
1802017
The RING 2.0 web server for high quality residue interaction networks
D Piovesan, G Minervini, SCE Tosatto
Nucleic acids research 44 (W1), W367-W374, 2016
1632016
MobiDB 3.0: more annotations for intrinsic disorder, conformational diversity and interactions in proteins
D Piovesan, F Tabaro, L Paladin, M Necci, I Mičetić, C Camilloni, N Davey, ...
Nucleic acids research 46 (D1), D471-D476, 2018
852018
Simultaneous quantification of protein order and disorder
P Sormanni, D Piovesan, GT Heller, M Bonomi, P Kukic, C Camilloni, ...
Nature chemical biology 13 (4), 339-342, 2017
592017
INGA: protein function prediction combining interaction networks, domain assignments and sequence similarity
D Piovesan, M Giollo, E Leonardi, C Ferrari, SCE Tosatto
Nucleic acids research 43 (W1), W134-W140, 2015
562015
FFPred 2.0: improved homology-independent prediction of gene ontology terms for eukaryotic protein sequences
F Minneci, D Piovesan, D Cozzetto, DT Jones
PLoS One 8 (5), 2013
542013
RepeatsDB: a database of tandem repeat protein structures
T Di Domenico, E Potenza, I Walsh, R Gonzalo Parra, M Giollo, ...
Nucleic acids research 42 (D1), D352-D357, 2014
532014
MobiDB-lite: fast and highly specific consensus prediction of intrinsic disorder in proteins
M Necci, D Piovesan, Z Dosztányi, SCE Tosatto
Bioinformatics 33 (9), 1402-1404, 2017
492017
The human "magnesome": detecting magnesium binding sites on human proteins
D Piovesan, G Profiti, PL Martelli, R Casadio
BMC bioinformatics 13 (Suppl 14), S10, 2012
42*2012
BAR-PLUS: the Bologna Annotation Resource Plus for functional and structural annotation of protein sequences
D Piovesan, P Luigi Martelli, P Fariselli, A Zauli, I Rossi, R Casadio
Nucleic acids research 39 (suppl_2), W197-W202, 2011
302011
A comprehensive assessment of long intrinsic protein disorder from the DisProt database
M Necci, D Piovesan, Z Dosztányi, P Tompa, SCE Tosatto
Bioinformatics 34 (3), 445-452, 2018
292018
The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens
N Zhou, Y Jiang, TR Bergquist, AJ Lee, BZ Kacsoh, AW Crocker, ...
Genome biology 20 (1), 1-23, 2019
282019
FELLS: fast estimator of latent local structure
D Piovesan, I Walsh, G Minervini, SCE Tosatto
Bioinformatics 33 (12), 1889-1891, 2017
282017
RepeatsDB 2.0: improved annotation, classification, search and visualization of repeat protein structures
L Paladin, L Hirsh, D Piovesan, MA Andrade-Navarro, AV Kajava, ...
Nucleic acids research 45 (D1), D308-D312, 2017
232017
Large‐scale analysis of intrinsic disorder flavors and associated functions in the protein sequence universe
M Necci, D Piovesan, SCE Tosatto
Protein Science 25 (12), 2164-2174, 2016
232016
VHLdb: A database of von Hippel-Lindau protein interactors and mutations
F Tabaro, G Minervini, F Sundus, F Quaglia, E Leonardi, D Piovesan, ...
Scientific reports 6, 31128, 2016
182016
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Articles 1–20