John D Blischak
John D Blischak
Postdoctoral Scholar, University of Chicago
Verified email at uchicago.edu - Homepage
Title
Cited by
Cited by
Year
Methylation QTLs are associated with coordinated changes in transcription factor binding, histone modifications, and gene expression levels
NE Banovich, X Lan, G McVicker, B Van de Geijn, JF Degner, JD Blischak, ...
PLoS Genet 10 (9), e1004663, 2014
1892014
Batch effects and the effective design of single-cell gene expression studies
PY Tung, JD Blischak, CJ Hsiao, DA Knowles, JE Burnett, JK Pritchard, ...
Scientific reports 7, 39921, 2017
1642017
A quick introduction to version control with Git and GitHub
JD Blischak, ER Davenport, G Wilson
PLoS computational biology 12 (1), e1004668, 2016
892016
Mycobacterial infection induces a specific human innate immune response
JD Blischak, L Tailleux, A Mitrano, LB Barreiro, Y Gilad
bioRxiv, 2015
432015
Determining the genetic basis of anthracycline-cardiotoxicity by molecular response QTL mapping in induced cardiomyocytes
DA Knowles, CK Burrows, JD Blischak, KM Patterson, DJ Serie, N Norton, ...
Elife 7, e33480, 2018
282018
Discovery and characterization of variance QTLs in human induced pluripotent stem cells
AK Sarkar, PY Tung, JD Blischak, JE Burnett, YI Li, M Stephens, Y Gilad
PLoS genetics 15 (4), e1008045, 2019
142019
A comparative study of endoderm differentiation in humans and chimpanzees
LE Blake, SM Thomas, JD Blischak, CJ Hsiao, C Chavarria, M Myrthil, ...
Genome biology 19 (1), 1-18, 2018
122018
Predicting susceptibility to tuberculosis based on gene expression profiling in dendritic cells
JD Blischak, L Tailleux, M Myrthil, C Charlois, E Bergot, A Dinh, G Morizot, ...
Scientific reports 7 (1), 1-11, 2017
62017
Patterns of transcriptional response to 1, 25-dihydroxyvitamin D3 and bacterial lipopolysaccharide in primary human monocytes
SN Kariuki, JD Blischak, S Nakagome, DB Witonsky, A Di Rienzo
G3: Genes, Genomes, Genetics 6 (5), 1345-1355, 2016
62016
Mycobacterial infection induces a specific human innate immune response. Sci Rep. 2015; 5: 16882
JD Blischak, L Tailleux, A Mitrano, LB Barreiro, Y Gilad
5
Characterizing and inferring quantitative cell cycle phase in single-cell RNA-seq data analysis
CJ Hsiao, PY Tung, JD Blischak, JE Burnett, KA Barr, KK Dey, ...
Genome research 30 (4), 611-621, 2020
42020
Creating and sharing reproducible research code the workflowr way
JD Blischak, P Carbonetto, M Stephens
F1000Research 8, 2019
22019
A Methodological Assessment and Characterization of Genetically-Driven Variation in Three Human Phosphoproteomes
BW Engelmann, CJ Hsiao, JD Blischak, Y Fourne, Z Khan, M Ford, ...
Scientific reports 8 (1), 1-13, 2018
2018
Investigating susceptibility to tuberculosis using functional genomics approaches
JD Blischak
The University of Chicago, 2016
2016
The Laron Mouse
JJ Kopchick, JD Blischak
Laron Syndrome-From Man to Mouse, 429-432, 2011
2011
The Effects of Growth Hormone and Insulin-Like Growth Factor-1 Treatments on Hepatic Gene Expression in Obese and Diabetic Mice with Nonalcoholic Fatty Liver Disease
JD Blischak
Ohio University, 2010
2010
Mycobacterial infection induces a specific human innate immune
JD Blischak, L Tailleux, A Mitrano, LB Barreiro, Y Gilad
way [version 1; peer review: awaiting peer review]
JD Blischak, P Carbonetto, M Stephens
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Articles 1–18