H. Metin Aktulga
H. Metin Aktulga
Assistant Professor, Computer Science and Engineering, Michigan State University
Verified email at cse.msu.edu - Homepage
TitleCited byYear
The ReaxFF Reactive Force-field: Development, Applications, and Future Directions
TP Senftle, S Hong, MM Islam, SB Kylasa, Y Zheng, YK Shin, ...
Nature PJ Computational Materials 2, 15011, 2016
3652016
Parallel reactive molecular dynamics: Numerical methods and algorithmic techniques
HM Aktulga, JC Fogarty, SA Pandit, AY Grama
Parallel Computing 38 (4-5), 245-259, 2012
3402012
A reactive molecular dynamics simulation of the silica-water interface
JC Fogarty, HM Aktulga, AY Grama, ACT Van Duin, SA Pandit
The Journal of Chemical Physics 132, 174704, 2010
3152010
Improving the scalability of a symmetric iterative eigensolver for multi‐core platforms
HM Aktulga, C Yang, EG Ng, P Maris, JP Vary
Concurrency and Computation: Practice and Experience 26 (16), 2631-2651, 2014
65*2014
Optimizing Sparse Matrix-Multiple Vectors Multiplication for Nuclear Configuration Interaction Calculations
HM Aktulga, A Buluç, S Williams, C Yang
28th IEEE International Parallel & Distributed Processing Symposium (IPDPS 2014), 2014
502014
Topology-Aware Mappings for Large-Scale Eigenvalue Problems
H Aktulga, C Yang, E Ng, P Maris, J Vary
Euro-Par 2012 Parallel Processing, LNCS 7484, 830-842, 2012
482012
Reactive molecular dynamics: Numerical methods and algorithmic techniques
HM Aktulga, S Pandit, ACT van Duin, A Grama
SIAM J. Sci. Comput. 34 (1), C1–C23, 2012
482012
Large-scale ab initio configuration interaction calculations for light nuclei
P Maris, HM Aktulga, MA Caprio, ÜV Çatalyürek, EG Ng, D Oryspayev, ...
Journal of Physics: Conference Series 403 (1), 012019, 2012
332012
Parallel eigenvalue calculation based on multiple shift–invert Lanczos and contour integral based spectral projection method
HM Aktulga, L Lin, C Haine, EG Ng, C Yang
Parallel Computing 40 (7), 195-212, 2014
322014
PuReMD-GPU: A Reactive Molecular Dynamic Simulation Package for GPUs
SB Kylasa, HM Aktulga, A Grama
Journal of Computational Physics 272, 343-359, 2014
302014
Efficient global optimization of reactive force‐field parameters
M Dittner, J Müller, HM Aktulga, B Hartke
Journal of computational chemistry 36 (20), 1550-1561, 2015
232015
Strain relaxation in Si/Ge/Si nanoscale bars from molecular dynamics simulations
Y Park, HM Aktulga, A Grama, A Strachan
Journal of Applied Physics 106 (3), 034304-034304-6, 2009
222009
Exploring the future of out-of-core computing with compute-local non-volatile memory
M Jung, EH Wilson III, W Choi, J Shalf, HM Aktulga, C Yang, E Saule, ...
Proceedings of the International Conference on High Performance Computing …, 2013
182013
No Core CI calculations for light nuclei with chiral 2-and 3-body forces
P Maris, HM Aktulga, S Binder, A Calci, ÜV Çatalyürek, J Langhammer, ...
Journal of Physics: Conference Series 454 (1), 012063, 2013
172013
Identifying statistical dependence in genomic sequences via mutual information estimates
HM Aktulga, I Kontoyiannis, LA Lyznik, L Szpankowski, AY Grama, ...
EURASIP Journal on Bioinformatics and Systems Biology 2007, 3, 2007
172007
Accelerating nuclear configuration interaction calculations through a preconditioned block iterative eigensolver
M Shao, HM Aktulga, C Yang, EG Ng, P Maris, JP Vary
Computer Physics Communications 222, 1-13, 2018
152018
An Out-of-core Eigensolver on SSD-equipped Clusters
Z Zhou, E Saule, HM Aktulga, C Yang, EG Ng, P Maris, JP Vary, ...
2012 IEEE International Conference on Cluster Computing (CLUSTER), 248-256, 2012
142012
An out-of-core dataflow middleware to reduce the cost of large scale iterative solvers
Z Zhou, E Saule, HM Aktulga, C Yang, EG Ng, P Maris, JP Vary, ...
2012 41st International Conference on Parallel Processing Workshops (ICPPW …, 2012
142012
Optimizing the performance of reactive molecular dynamics simulations for many-core architectures
HM Aktulga, C Knight, P Coffman, KA O’Hearn, TR Shan, W Jiang
The International Journal of High Performance Computing Applications 33 (2 …, 2019
8*2019
A high performance block eigensolver for nuclear configuration interaction calculations
HM Aktulga, M Afibuzzaman, S Williams, A Buluç, M Shao, C Yang, ...
IEEE Transactions on Parallel and Distributed Systems 28 (6), 1550-1563, 2016
82016
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