| Improved CUT&RUN chromatin profiling tools MP Meers, TD Bryson, JG Henikoff, S Henikoff elife 8, e46314, 2019 | 347 | 2019 |
| Peak calling by Sparse Enrichment Analysis for CUT&RUN chromatin profiling MP Meers, D Tenenbaum, S Henikoff Epigenetics & chromatin 12, 1-11, 2019 | 290 | 2019 |
| Interrogating the function of metazoan histones using engineered gene clusters DJ McKay, S Klusza, TJR Penke, MP Meers, KP Curry, SL McDaniel, ... Developmental cell 32 (3), 373-386, 2015 | 139 | 2015 |
| Pioneer factor-nucleosome binding events during differentiation are motif encoded MP Meers, DH Janssens, S Henikoff Molecular cell 75 (3), 562-575. e5, 2019 | 119 | 2019 |
| MYCN amplification and ATRX mutations are incompatible in neuroblastoma M Zeineldin, S Federico, X Chen, Y Fan, B Xu, E Stewart, X Zhou, J Jeon, ... Nature communications 11 (1), 913, 2020 | 94 | 2020 |
| Poly (A) RNA‐binding proteins and polyadenosine RNA: new members and novel functions CP Wigington, KR Williams, MP Meers, GJ Bassell, AH Corbett Wiley Interdisciplinary Reviews: RNA 5 (5), 601-622, 2014 | 94 | 2014 |
| Old cogs, new tricks: the evolution of gene expression in a chromatin context PB Talbert, MP Meers, S Henikoff Nature Reviews Genetics 20 (5), 283-297, 2019 | 93 | 2019 |
| Automated in situ chromatin profiling efficiently resolves cell types and gene regulatory programs DH Janssens, SJ Wu, JF Sarthy, MP Meers, CH Myers, JM Olson, ... Epigenetics & chromatin 11, 1-14, 2018 | 63 | 2018 |
| Developmental arrest of Drosophila survival motor neuron (Smn) mutants accounts for differences in expression of minor intron-containing genes EL Garcia, Z Lu, MP Meers, K Praveen, AG Matera Rna 19 (11), 1510-1516, 2013 | 57 | 2013 |
| Automated CUT&Tag profiling of chromatin heterogeneity in mixed-lineage leukemia DH Janssens, MP Meers, SJ Wu, E Babaeva, S Meshinchi, JF Sarthy, ... Nature genetics 53 (11), 1586-1596, 2021 | 46 | 2021 |
| Histone deposition pathways determine the chromatin landscapes of H3. 1 and H3. 3 K27M oncohistones JF Sarthy, MP Meers, DH Janssens, JG Henikoff, H Feldman, ... Elife 9, e61090, 2020 | 46 | 2020 |
| Histone gene replacement reveals a post-transcriptional role for H3K36 in maintaining metazoan transcriptome fidelity MP Meers, T Henriques, CA Lavender, DJ McKay, BD Strahl, RJ Duronio, ... Elife 6, e23249, 2017 | 39 | 2017 |
| CUT&Tag2for1: a modified method for simultaneous profiling of the accessible and silenced regulome in single cells DH Janssens, DJ Otto, MP Meers, M Setty, K Ahmad, S Henikoff Genome biology 23 (1), 81, 2022 | 36 | 2022 |
| Transcription start site profiling uncovers divergent transcription and enhancer-associated RNAs in Drosophila melanogaster MP Meers, K Adelman, RJ Duronio, BD Strahl, DJ McKay, AG Matera BMC genomics 19, 1-20, 2018 | 34 | 2018 |
| Selective androgen receptor modulators activate the canonical prostate cancer androgen receptor program and repress cancer growth MD Nyquist, LS Ang, A Corella, IM Coleman, MP Meers, AJ Christiani, ... The Journal of clinical investigation 131 (10), 2021 | 31 | 2021 |
| Multifactorial profiling of epigenetic landscapes at single-cell resolution using MulTI-Tag MP Meers, G Llagas, DH Janssens, CA Codomo, S Henikoff Nature Biotechnology 41 (5), 708-716, 2023 | 27 | 2023 |
| Nucleosome patterns in circulating tumor DNA reveal transcriptional regulation of advanced prostate cancer phenotypes N De Sarkar, RD Patton, AL Doebley, B Hanratty, M Adil, AJ Kreitzman, ... Cancer discovery 13 (3), 632-653, 2023 | 15 | 2023 |
| Multifactorial chromatin regulatory landscapes at single cell resolution MP Meers, G Llagas, DH Janssens, CA Codomo, S Henikoff bioRxiv, 2021.07. 08.451691, 2021 | 10 | 2021 |
| Distinct roles for canonical and variant histone H3 lysine-36 in Polycomb silencing HR Salzler, V Vandadi, BD McMichael, JC Brown, SA Boerma, ... Science Advances 9 (9), eadf2451, 2023 | 6 | 2023 |
| A streamlined protocol and analysis pipeline for CUT&RUN chromatin profiling MP Meers, T Bryson, S Henikoff BioRxiv, 569129, 2019 | 6 | 2019 |
