Haitham Ashoor
Haitham Ashoor
Assistant Computational Scientist at Jackson Laboratory for Genomic Medicine
Verified email at kaust.edu.sa
TitleCited byYear
HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models
IV Kulakovskiy, IE Vorontsov, IS Yevshin, AV Soboleva, AS Kasianov, ...
Nucleic acids research 44 (D1), D116-D125, 2015
1392015
Genomes of coral dinoflagellate symbionts highlight evolutionary adaptations conducive to a symbiotic lifestyle
M Aranda, Y Li, YJ Liew, S Baumgarten, O Simakov, MC Wilson, J Piel, ...
Scientific Reports 6, 39734, 2016
1202016
An integrated expression atlas of miRNAs and their promoters in human and mouse
D De Rie, I Abugessaisa, T Alam, E Arner, P Arner, H Ashoor, G Åström, ...
Nature biotechnology 35 (9), 872, 2017
1052017
HMCan: a method for detecting chromatin modifications in cancer samples using ChIP-seq data
H Ashoor, A Hérault, A Kamoun, F Radvanyi, VB Bajic, E Barillot, V Boeva
Bioinformatics 29 (23), 2979-2986, 2013
282013
DENdb: database of integrated human enhancers
H Ashoor, D Kleftogiannis, A Radovanovic, VB Bajic
Database 2015, 2015
262015
DDR: efficient computational method to predict drug–target interactions using graph mining and machine learning approaches
RS Olayan, H Ashoor, VB Bajic
Bioinformatics 34 (7), 1164-1173, 2017
202017
FARNA: knowledgebase of inferred functions of non-coding RNA transcripts
T Alam, M Uludag, M Essack, A Salhi, H Ashoor, JB Hanks, C Kapfer, ...
Nucleic acids research 45 (5), 2838-2848, 2017
152017
Dragon TIS Spotter: an Arabidopsis-derived predictor of translation initiation sites in plants
A Magana-Mora, H Ashoor, BR Jankovic, A Kamau, K Awara, ...
Bioinformatics 29 (1), 117-118, 2012
72012
HMCan-diff: a method to detect changes in histone modifications in cells with different genetic characteristics
H Ashoor, C Louis-Brennetot, I Janoueix-Lerosey, VB Bajic, V Boeva
Nucleic acids research 45 (8), e58-e58, 2017
52017
Recognition of translation initiation sites in arabidopsis Thaliana
H Ashoor, AM Mora, K Awara, BR Jankovic, R Chowdhary, JAC Archer, ...
Systemic approaches in bioinformatics and computational systems biology …, 2012
52012
A novel method for improved accuracy of transcription factor binding site prediction
AM Khamis, O Motwalli, R Oliva, BR Jankovic, YA Medvedeva, H Ashoor, ...
Nucleic acids research 46 (12), e72-e72, 2018
42018
TELS: A Novel Computational Framework for Identifying Motif Signatures of Transcribed Enhancers
D Kleftogiannis, H Ashoor, VB Bajic
Genomics, proteomics & bioinformatics 16 (5), 332-341, 2018
12018
Genome Informatics
AK Kesarwani, A Malhotra, A Srivastava, G Ananda, H Ashoor, P Kumar, ...
Academic Press, 2019
2019
Code for" DDR: a method to predict drug target interactions using multiple similarities"
RS Olayan, H Ashoor, VB Bajic
Bitbucket, 2017
2017
Computational Methods for ChIP-seq Data Analysis and Applications
H Ashoor
2017
Motif signatures of transcribed enhancers
D Kleftogiannis, H Ashoor, N Zarokanellos, VB Bajic
bioRxiv, 188557, 2017
2017
An integrated expression atlas of miRNAs and their promoters in human and mouse
P Klinken, T Ha, K Summers, K Vitting-Seerup, M Detmar, M Yoneda, ...
The system can't perform the operation now. Try again later.
Articles 1–17