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Nils Homer
Nils Homer
Fulcrum Genomics
Verified email at fulcrumgenomics.com - Homepage
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Cited by
Year
The sequence alignment/map format and SAMtools
H Li, B Handsaker, A Wysoker, T Fennell, J Ruan, N Homer, G Marth, ...
bioinformatics 25 (16), 2078-2079, 2009
557142009
An integrated map of genetic variation from 1,092 human genomes
1000 Genomes Project Consortium
Nature 491 (7422), 56, 2012
82932012
An integrated semiconductor device enabling non-optical genome sequencing
JM Rothberg, W Hinz, TM Rearick, J Schultz, W Mileski, M Davey, ...
Nature 475 (7356), 348-352, 2011
29402011
Resolving individuals contributing trace amounts of DNA to highly complex mixtures using high-density SNP genotyping microarrays
N Homer, S Szelinger, M Redman, D Duggan, W Tembe, J Muehling, ...
PLoS genetics 4 (8), e1000167, 2008
14902008
A survey of sequence alignment algorithms for next-generation sequencing
H Li, N Homer
Briefings in bioinformatics 11 (5), 473-483, 2010
12412010
BFAST: an alignment tool for large scale genome resequencing
N Homer, B Merriman, SF Nelson
PloS one 4 (11), e7767, 2009
7442009
Subgroup 1000 Genome Project Data Processing. 2009. The Sequence Alignment/Map format and SAMtools
H Li, B Handsaker, A Wysoker, T Fennell, J Ruan, N Homer, G Marth, ...
Bioinformatics 25 (16), 2078-2079, 2009
5892009
Identification of genetic variants using bar-coded multiplexed sequencing
DW Craig, JV Pearson, S Szelinger, A Sekar, M Redman, JJ Corneveaux, ...
Nature methods 5 (10), 887-893, 2008
4632008
Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel
O Delaneau, J Marchini
Nature communications 5 (1), 3934, 2014
4452014
Integrative annotation of variants from 1092 humans: application to cancer genomics
E Khurana, Y Fu, V Colonna, XJ Mu, HM Kang, T Lappalainen, A Sboner, ...
Science 342 (6154), 1235587, 2013
4202013
U87MG decoded: the genomic sequence of a cytogenetically aberrant human cancer cell line
MJ Clark, N Homer, BD O'Connor, Z Chen, A Eskin, H Lee, B Merriman, ...
PLoS genetics 6 (1), e1000832, 2010
3842010
Common sequence variants on 20q11. 22 confer melanoma susceptibility
KM Brown, S MacGregor, GW Montgomery, DW Craig, ZZ Zhao, ...
Nature genetics 40 (7), 838-840, 2008
2662008
Identification of the genetic basis for complex disorders by use of pooling-based genomewide single-nucleotide–polymorphism association studies
JV Pearson, MJ Huentelman, RF Halperin, WD Tembe, S Melquist, ...
The American Journal of Human Genetics 80 (1), 126-139, 2007
1842007
Subgroup 1000 Genome Project Data Processing. 2009
H Li, B Handsaker, A Wysoker, T Fennell, J Ruan, N Homer, G Marth, ...
The sequence alignment/map format and SAMtools. Bioinformatics 25 (16), 2078 …, 2009
1542009
An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge
CA Brownstein, AH Beggs, N Homer, B Merriman, TW Yu, KC Flannery, ...
Genome biology 15, 1-18, 2014
1242014
Improved variant discovery through local re-alignment of short-read next-generation sequencing data using SRMA
N Homer, SF Nelson
Genome biology 11, 1-12, 2010
912010
A genome-wide analysis identifies genetic variants in the RELN gene associated with otosclerosis
I Schrauwen, M Ealy, MJ Huentelman, M Thys, N Homer, ...
The American Journal of Human Genetics 84 (3), 328-338, 2009
862009
449 Abecasis G, Durbin R. 2009. The sequence alignment/map format and 450 SAMtools
H Li, B Handsaker, A Wysoker, T Fennell, J Ruan, N Homer, G Marth
Bioinformatics 25, 2078-2079, 2009
692009
Methods and systems for nucleic acid sequence analysis
N Homer
US Patent 8,594,951, 2013
59*2013
1000 Genome Project Data Processing Subgroup1000 Genome Project Data Processing Subgroup (2009) The sequence alignment/map format and SAMtools
H Li, B Handsaker, A Wysoker, T Fennell, J Ruan, N Homer, G Marth, ...
Bioinformatics 25 (16), 2078-2079, 2009
592009
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