Michał Startek
Michał Startek
University of Warsaw, Faculty of Mathematics, Informatics and Mechanics; Institute of Immunology
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Computer‐assisted synthetic planning: the end of the beginning
S Szymkuć, EP Gajewska, T Klucznik, K Molga, P Dittwald, M Startek, ...
Angewandte Chemie International Edition 55 (20), 5904-5937, 2016
Efficient syntheses of diverse, medicinally relevant targets planned by computer and executed in the laboratory
T Klucznik, B Mikulak-Klucznik, MP McCormack, H Lima, S Szymkuć, ...
Chem 4 (3), 522-532, 2018
Jaccard/Tanimoto similarity test and estimation methods for biological presence-absence data
NC Chung, BŻ Miasojedow, M Startek, A Gambin
BMC bioinformatics 20 (Suppl 15), 644, 2019
Genome-wide analyses of LINE–LINE-mediated nonallelic homologous recombination
M Startek, P Szafranski, T Gambin, IM Campbell, P Hixson, CA Shaw, ...
Nucleic acids research 43 (4), 2188-2198, 2015
IsoSpec: Hyperfast fine structure calculator
MK Łacki, M Startek, D Valkenborg, A Gambin
Analytical chemistry 89 (6), 3272-3277, 2017
Algorithmic discovery of tactical combinations for advanced organic syntheses
EP Gajewska, S Szymkuć, P Dittwald, M Startek, O Popik, J Mlynarski, ...
Chem 6 (1), 280-293, 2020
Genomic parasites or symbionts? Modeling the effects of environmental pressure on transposition activity in asexual populations
M Startek, A Le Rouzic, P Capy, D Grzebelus, A Gambin
Theoretical population biology 90, 145-151, 2013
ComputergestŘtzte Syntheseplanung: Das Ende vom Anfang
S Szymkuć, EP Gajewska, T Klucznik, K Molga, P Dittwald, M Startek, ...
Angewandte Chemie 128 (20), 6004-6040, 2016
Chromosome conformation capture-on-chip analysis of long-range cis-interactions of the SOX9 promoter
M Smyk, P Szafranski, M Startek, A Gambin, P Stankiewicz
Chromosome Research 21 (8), 781-788, 2013
OpenTIMS, TimsPY, and TimsR: open and easy access to timsTOF raw data
MK Łaški, MP Startek, S Brehmer, U Distler, S Tenzer
Journal of proteome research 20 (4), 2122-2129, 2021
IsoSpec2: ultrafast fine structure calculator
MK Łącki, D Valkenborg, MP Startek
Analytical chemistry 92 (14), 9472-9475, 2020
The wasserstein distance as a dissimilarity measure for mass spectra with application to spectral deconvolution
S Majewski, MA Ciach, M Startek, W Niemyska, B Miasojedow, A Gambin
18th International Workshop on Algorithms in Bioinformatics (WABI 2018), 2018
midiaPASEF maximizes information content in data-independent acquisition proteomics
U Distler, MK Łącki, MP Startek, D Teschner, S Brehmer, J Decker, ...
BioRxiv, 2023.01. 30.526204, 2023
Masserstein: Linear regression of mass spectra by optimal transport
MA Ciach, B Miasojedow, G Skoraczyński, S Majewski, M Startek, ...
Rapid Communications in Mass Spectrometry, e8956, 2021
MuTAnT: a family of Mutator-like transposable elements targeting TA microsatellites in Medicago truncatula
K Stawujak, M Startek, A Gambin, D Grzebelus
Genetica 143 (4), 433-440, 2015
TIRfinder: a web tool for mining class II transposons carrying terminal inverted repeats
T Gambin, M Startek, K Walczak, J Paszek, D Grzebelus, A Gambin
Evolutionary Bioinformatics 9, EBO. S10619, 2013
masstodon: A Tool for Assigning Peaks and Modeling Electron Transfer Reactions in Top-Down Mass Spectrometry
MK Łacki, F Lermyte, B Miasojedow, MP Startek, F Sobott, D Valkenborg, ...
Analytical chemistry 91 (3), 1801-1807, 2019
Subset seed extension to protein blast
A Gambin, S Lasota, M Startek, M Sykulski, L NoÚ, G Kucherov
International Conference on Bioinformatics Models, Methods and Algorithms 2á…, 2011
Efficient alternatives to PSI-BLAST
M Startek, S Lasota, M Sykulski, A Bułak, L NoÚ, G Kucherov, A Gambin
Bulletin of the Polish Academy of Sciences. Technical Sciences 60 (3), 495-505, 2012
Inferring transposons activity chronology by TRANScendence – TEs database and de-novo mining tool
MP Startek, J Nogły, A Gromadka, D Grzebelus, A Gambin
BMC bioinformatics 18, 57-66, 2017
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