| Microbiome networks: a systems framework for identifying candidate microbial assemblages for disease management R Poudel, A Jumpponen, DC Schlatter, TC Paulitz, BBMS Gardener, ... Phytopathology 106 (10), 1083-1096, 2016 | 286 | 2016 |
| Rootstocks shape the rhizobiome: rhizosphere and endosphere bacterial communities in the grafted tomato system R Poudel, A Jumpponen, MM Kennelly, CL Rivard, L Gomez-Montano, ... Applied and Environmental Microbiology 85 (2), e01765-18, 2019 | 95 | 2019 |
| Network analysis: a systems framework to address grand challenges in plant pathology KA Garrett, RI Alcalá-Briseño, KF Andersen, CE Buddenhagen, ... Annual review of phytopathology 56, 559-580, 2018 | 62 | 2018 |
| Precipitation increases the abundance of some groups of root‐associated fungal endophytes in a semiarid grassland J Herrera, R Poudel, KA Nebel, SL Collins Ecosphere 2 (4), 1-14, 2011 | 48 | 2011 |
| Molecular characterization of coprophilous fungal communities reveals sequences related to root-associated fungal endophytes J Herrera, R Poudel, HH Khidir Microbial Ecology 61, 239-244, 2011 | 46 | 2011 |
| Soil influences colonization of root-associated fungal endophyte communities of maize, wheat, and their progenitors D Bokati, J Herrera, R Poudel Journal of Mycology 2016, 2016 | 41 | 2016 |
| Exposure to airborne bacteria depends upon vertical stratification and vegetation complexity JM Robinson, C Cando-Dumancela, RE Antwis, R Cameron, C Liddicoat, ... Scientific Reports 11 (1), 9516, 2021 | 35 | 2021 |
| Assessment of root-associated fungal communities colonizing two species of tropical grasses reveals incongruence to fungal communities of North American native grasses J Herrera, R Poudel, D Bokati Fungal Ecology 6 (1), 65-69, 2013 | 26 | 2013 |
| Penicillin trunk injection affects bacterial community structure in citrus trees MS Ascunce, K Shin, JC Huguet-Tapia, R Poudel, KA Garrett, ... Microbial ecology 78, 457-469, 2019 | 21 | 2019 |
| Effect of p53 activity on the sensitivity of human glioblastoma cells to PARP‐1 inhibitor in combination with topoisomerase I inhibitor or radiation F Sabbatino, C Fusciello, D Somma, R Pacelli, R Poudel, D Pepin, ... Cytometry Part A 85 (11), 953-961, 2014 | 18 | 2014 |
| Effective altruism as an ethical lens on research priorities KA Garrett, RI Alcalá-Briseño, KF Andersen, J Brawner, RA Choudhury, ... Phytopathology 110 (4), 708-722, 2020 | 11 | 2020 |
| Rice plant–soil microbiome interactions driven by root and shoot biomass CP Fernández-Baca, AR Rivers, JE Maul, W Kim, R Poudel, AM McClung, ... Diversity 13 (3), 125, 2021 | 7 | 2021 |
| GuideMaker: Software to design CRISPR-Cas guide RNA pools in non-model genomes R Poudel, LT Rodriguez, CR Reisch, AR Rivers GigaScience 11, giac007, 2022 | 6 | 2022 |
| A rice variety with a high straw biomass retained nitrogen and phosphorus without affecting soil bacterial species KAG Xinqiang Liang, Fayong Li, Sheng Wang, Guifen Hua, Miaomiao He ... Soil Ecol. Lett., 2020 | 5 | 2020 |
| Integration of Phenotypes in Microbiome Networks for Designing Synthetic Communities: a Study of Mycobiomes in the Grafted Tomato System R Poudel, A Jumpponen, MM Kennelly, C Rivard, L Gomez-Montano, ... Applied and Environmental Microbiology 89 (6), e01843-22, 2023 | 4 | 2023 |
| CHAPTER 3: Adapting Disease Management Systems Under Global Change KA Garrett, RI Alcalá-Briseño, KF Andersen, RA Choudhury, W Dantes, ... Emerging plant diseases and global food security, 31-50, 2020 | 4 | 2020 |
| Elucidating the effects of organic vs. conventional cropping practice and rhizobia inoculation on rhizosphere microbial diversity and yield of peanut D Paudel, L Wang, R Poudel, JP Acharya, S Victores, CHL de Souza, ... Environmental Microbiome 18 (1), 60, 2023 | 2 | 2023 |
| An Arrayed Transposon Library of Ruegeria pomeroyi DSS-3 C Mejia, L Trujillo Rodriguez, R Poudel, A Ellington, AR Rivers, ... bioRxiv, 2022.09. 11.507510, 2022 | 1 | 2022 |
| Integration of system phenotypes in microbiome networks to identify candidate synthetic communities: a study of the grafted tomato rhizobiome R Poudel, A Jumpponen, MM Kennelly, C Rivard, L Gomez-Montano, ... bioRxiv, 2019.12. 12.874966, 2019 | 1 | 2019 |
| Microbiome networks: A systems framework for identifying candidate microbial assemblages for disease management in the era of genomics and phytobiomes R Poudel, L Meyer, A Jumpponen, MM Kennelly, CL Rivard, DC Schlatter, ... 2017 APS Annual Meeting, 2017 | 1 | 2017 |
Karen A. GarrettUniversity of FloridaVerified email at ufl.edu
