| OpenWorm: an open-science approach to modeling Caenorhabditis elegans B Szigeti, P Gleeson, M Vella, S Khayrulin, A Palyanov, J Hokanson, ... Frontiers in computational neuroscience 8, 137, 2014 | 181 | 2014 |
| OpenWorm: overview and recent advances in integrative biological simulation of Caenorhabditis elegans GP Sarma, CW Lee, T Portegys, V Ghayoomie, T Jacobs, B Alicea, ... Philosophical Transactions of the Royal Society B 373 (1758), 20170382, 2018 | 134 | 2018 |
| AUG_hairpin: prediction of a downstream secondary structure influencing the recognition of a translation start site AV Kochetov, A Palyanov, II Titov, D Grigorovich, A Sarai, NA Kolchanov BMC bioinformatics 8, 1-7, 2007 | 58 | 2007 |
| Towards a virtual C. elegans: A framework for simulation and visualization of the neuromuscular system in a 3D physical environment A Palyanov, S Khayrulin, SD Larson, A Dibert In silico biology 11 (3-4), 137-147, 2012 | 49 | 2012 |
| Application of smoothed particle hydrodynamics to modeling mechanisms of biological tissue A Palyanov, S Khayrulin, SD Larson Advances in Engineering Software 98, 1-11, 2016 | 47 | 2016 |
| Three-dimensional simulation of the Caenorhabditis elegans body and muscle cells in liquid and gel environments for behavioural analysis A Palyanov, S Khayrulin, SD Larson Philosophical Transactions of the Royal Society B: Biological Sciences 373 …, 2018 | 37 | 2018 |
| Hydrodynamic description of protein folding SF Chekmarev, AY Palyanov, M Karplus Physical review letters 100 (1), 018107, 2008 | 26 | 2008 |
| Deploying and optimizing embodied simulations of large-scale spiking neural networks on HPC infrastructure B Feldotto, JM Eppler, C Jimenez-Romero, C Bignamini, CE Gutierrez, ... Frontiers in neuroinformatics 16, 884180, 2022 | 14 | 2022 |
| Insights from the HuR-interacting transcriptome: ncRNAs, ubiquitin pathways, and patterns of secondary structure dependent RNA interactions G St Laurent, D Shtokalo, M Heydarian, A Palyanov, D Babiy, J Zhou, ... Molecular genetics and genomics 287, 867-879, 2012 | 13 | 2012 |
| A lattice protein with an amyloidogenic latent state: Stability and folding kinetics AY Palyanov, SV Krivov, M Karplus, SF Chekmarev The Journal of Physical Chemistry B 111 (10), 2675-2687, 2007 | 13 | 2007 |
| From decision to action: Detailed modelling of frog tadpoles reveals neuronal mechanisms of decision-making and reproduces unpredictable swimming movements in response to … A Ferrario, A Palyanov, S Koutsikou, W Li, S Soffe, A Roberts, R Borisyuk PLoS Computational Biology 17 (12), e1009654, 2021 | 10 | 2021 |
| The OpenWorm Project: currently available resources and future plans P Gleeson, M Cantarelli, M Currie, J Hokanson, G Idili, S Khayrulin, ... BMC neuroscience 16 (Suppl 1), P141, 2015 | 7 | 2015 |
| The NeuroML C. elegans connectome T Busbice, P Gleeson, S Khayrulin, M Cantarelli, A Dibert, G Idili, ... Neuroinf. Abstract book, 82-83, 2012 | 7 | 2012 |
| On Separation between Metric Observers in Segal’s Compact Cosmos A Levichev, A Palyanov Journal of Modern Physics 6 (14), 2040-2049, 2015 | 6 | 2015 |
| Some details of signal propagation in the nervous system of C. elegans AY Palyanov, AS Ratushnyak Russian Journal of Genetics: Applied Research 5, 642-649, 2015 | 6 | 2015 |
| Sibernetic: A software complex based on the PCI SPH algorithm aimed at simulation problems in biomechanics AY Palyanov, SS Khayrulin Russian Journal of Genetics: Applied Research 5, 635-641, 2015 | 6 | 2015 |
| Программная среда для изучения и моделирования нейромышечной системы нематоды C. elegans в физическом окружении. АЮ Пальянов, АА Диберт Перспективы систем информатики, 217-220, 2009 | 6 | 2009 |
| The Wigner-Segal method as applied to the problem of quarks' and leptons' generations HP Jakobsen, AV Levichev, AY Palyanov Знания-Онтологии-Теории (ЗОНТ-2021), 349-357, 2021 | 5 | 2021 |
| Integration of predictive-corrective incompressible SPH and Hodgkin-Huxley based models in the OpenWorm in silico model of C. elegans M Vella, A Palyanov, P Gleeson, S Khayrulin BMC Neuroscience 14, 1-1, 2013 | 5 | 2013 |
| Standard charges of quarks determination in terms of the multi-level model AV Levichev, AY Palyanov Знания-Онтологии-Теории (ЗОНТ-2019), 222-226, 2019 | 4 | 2019 |
Sergey KhayrulinA.P. Ershov INSTITUTE OF INFORMATICS SYSTEMS Russian Academy of Sciences Siberian BranchVerified email at iis.nsk.su
