Farzaneh M. Parizi

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	All	Since 2019
Citations	23	23
h-index	2	2
i10-index	1	1

2022202320241 13 9

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Li C XueRadboud University Medical CenterVerified email at radboudumc.nl
Dario F. MarzellaMedical BioSciences department, RadboudumcVerified email at radboudumc.nl
Daniel T. RademakerPostdoctoral Researcher at RadboudumcVerified email at radboudumc.nl
Peter A.C. 't HoenProfessor Bioinformatics, Centre for Molecular and Biomolecular Informatics, Radboudumc NijmegenVerified email at radboudumc.nl
Nicolas RenaudSection Head Natural Sciences & Engineering @ NL eScience CenterVerified email at esciencecenter.nl
Derek van TilborgEindhoven University of TechnologyVerified email at tue.nl
Giulia CrocioniResearch Software Engineer, Netherlands eScience CenterVerified email at esciencecenter.nl
Mohammad Hossein Karimi-JafariAssociate Professor of Bioinformatics, University of TehranVerified email at ut.ac.ir
Eghbal G MansooriShiraz UniversityVerified email at shirazu.ac.ir

Farzaneh M. Parizi

RadboudUMC

Verified email at radboudumc.nl

Bioinformatics


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PANDORA: a fast, anchor-restrained modelling protocol for peptide: MHC complexes DF Marzella, FM Parizi, D Tilborg, N Renaud, D Sybrandi, R Buzatu, ... Frontiers in Immunology 13, 878762, 2022	17	2022
PANDORA v2. 0: Benchmarking peptide-MHC II models and software improvements FM Parizi, DF Marzella, G Ramakrishnan, PAC ‘t Hoen, MH Karimi-Jafari, ... Frontiers in Immunology 14, 1285899, 2023	3	2023
PANDORA: a fast, anchor-restrained modelling protocol for peptide: MHC complexes FM Parizi, DF Marzella, DV Tilborg, N Renaud, D Sybrandi, R Buzatu, ... bioRxiv, 2022.03. 04.482467, 2022	2	2022
The PANDORA software for anchor-restrained peptide: MHC modeling DF Marzella, G Crocioni, FM Parizi, LC Xue Computational Vaccine Design, 251-271, 2023	1	2023
DeepRank2: Mining 3D Protein Structures with Geometric Deep Learning G Crocioni, DL Bodor, C Baakman, FM Parizi, DT Rademaker, ... Journal of Open Source Software 9 (94), 5983, 2024		2024
Synergizing Geometric Deep Learning and Data-Centric Methods for Improved Protein Structural Alignment DT Rademaker, JM van Dijk, FM Parizi, LC Xue bioRxiv, 2023.07. 14.549112, 2023		2023
Automatic generation of internal coordinates F Meimandi Parizi, M Ashoori, MH Karimi-jafari The 6th Iranian Conference on Bioinformatic, 2016		2016
A novel protein structural classes' prediction system using fuzzy classification F Meimandi Parizi, E G. Mansoori 11th Intelligent Systems Conference, 2013		2013
A Fuzzy Rule-Based Classification System for classification of protein structural classes FM Parizi, EG Mansoori 7thSASTech 2013, 0

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