Valerio Bianchi
Valerio Bianchi
Enza Zaden
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Cited by
Selective transcriptional regulation by Myc in cellular growth control and lymphomagenesis
A Sabo, TR Kress, M Pelizzola, S De Pretis, MM Gorski, A Tesi, MJ Morelli, ...
Nature 511 (7510), 488-492, 2014
A genetic variant associated with five vascular diseases is a distal regulator of endothelin-1 gene expression
RM Gupta, J Hadaya, A Trehan, SM Zekavat, C Roselli, D Klarin, ...
Cell 170 (3), 522-533. e15, 2017
methylPipe and compEpiTools: a suite of R packages for the integrative analysis of epigenomics data
K Kishore, S de Pretis, R Lister, MJ Morelli, V Bianchi, B Amati, JR Ecker, ...
BMC bioinformatics 16 (1), 1-11, 2015
Identification of MYC-dependent transcriptional programs in oncogene-addicted liver tumors
TR Kress, P Pellanda, L Pellegrinet, V Bianchi, P Nicoli, M Doni, ...
Cancer research 76 (12), 3463-3472, 2016
Integrated systems for NGS data management and analysis: open issues and available solutions
V Bianchi, A Ceol, AGE Ogier, S De Pretis, E Galeota, K Kishore, P Bora, ...
Frontiers in genetics 7, 75, 2016
The mitochondrial translation machinery as a therapeutic target in Myc-driven lymphomas
A D'Andrea, I Gritti, P Nicoli, M Giorgio, M Doni, A Conti, V Bianchi, ...
Oncotarget 7 (45), 72415, 2016
4C-seq from beginning to end: A detailed protocol for sample preparation and data analysis
PHL Krijger, G Geeven, V Bianchi, CRE Hilvering, W de Laat
Methods 170, 17-32, 2020
Transcription-factor-dependent enhancer transcription defines a gene regulatory network for cardiac rhythm
XH Yang, RD Nadadur, CRE Hilvering, V Bianchi, M Werner, SR Mazurek, ...
Elife 6, e31683, 2017
Mutual epithelium‐macrophage dependency in liver carcinogenesis mediated by ST18
M Rava, A D'Andrea, M Doni, TR Kress, R Ostuni, V Bianchi, MJ Morelli, ...
Hepatology 65 (5), 1708-1719, 2017
Identification of binding pockets in protein structures using a knowledge-based potential derived from local structural similarities
V Bianchi, PF Gherardini, M Helmer-Citterich, G Ausiello
BMC bioinformatics 13 (4), 1-13, 2012
Epigenetic and transcriptional networks underlying atrial fibrillation
AF van Ouwerkerk, AW Hall, ZA Kadow, S Lazarevic, JS Reyat, ...
Circulation research 127 (1), 34-50, 2020
An enhancer cluster controls gene activity and topology of the SCN5A-SCN10A locus in vivo
JCK Man, RA Mohan, M van den Boogaard, CRE Hilvering, C Jenkins, ...
Nature communications 10 (1), 1-15, 2019
DBATE: database of alternative transcripts expression
V Bianchi, A Colantoni, A Calderone, G Ausiello, F Ferre, ...
Database 2013, 2013
Hominin-specific regulatory elements selectively emerged in oligodendrocytes and are disrupted in autism patients
B Castelijns, ML Baak, IS Timpanaro, CRM Wiggers, MW Vermunt, ...
Nature communications 11 (1), 1-12, 2020
Epigenetic analyses of human left atrial tissue identifies gene networks underlying atrial fibrillation
AW Hall, M Chaffin, C Roselli, H Lin, SA Lubitz, V Bianchi, G Geeven, ...
Circulation: Genomic and Precision Medicine 13 (6), e003085, 2020
webPDBinder: a server for the identification of ligand binding sites on protein structures
V Bianchi, I Mangone, F Ferre, M Helmer-Citterich, G Ausiello
Nucleic acids research 41 (W1), W308-W313, 2013
BAZ 2A safeguards genome architecture of ground‐state pluripotent stem cells
D Dalcher, JY Tan, C Bersaglieri, R Peña‐Hernández, E Vollenweider, ...
The EMBO journal 39 (23), e105606, 2020
Detailed regulatory interaction map of the human heart facilitates gene discovery for cardiovascular disease
V Bianchi, G Geeven, N Tucker, CRE Hilvering, AW Hall, C Roselli, M Hill, ...
CELL-D-19-01756, 2019
Alternative splicing tends to avoid partial removals of protein-protein interaction sites
A Colantoni, V Bianchi, PF Gherardini, GS Tomba, G Ausiello, ...
BMC genomics 14 (1), 1-12, 2013
TIP5 safeguards genome architecture of ground-state pluripotent stem cells
D Dalcher, JY Tan, C Bersaglieri, R Peña-Hernández, E Vollenweider, ...
bioRxiv, 2019
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