Emanuele Bosi
Emanuele Bosi
PhD, University of Pisa
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MeDuSa: a multi-draft based scaffolder
E Bosi, B Donati, M Galardini, S Brunetti, MF Sagot, P Lió, P Crescenzi, ...
Bioinformatics 31 (15), 2443-2451, 2015
1482015
Comparative genome-scale modelling of Staphylococcus aureus strains identifies strain-specific metabolic capabilities linked to pathogenicity
E Bosi, JM Monk, RK Aziz, M Fondi, V Nizet, BŲ Palsson
Proceedings of the National Academy of Sciences 113 (26), E3801-E3809, 2016
1052016
“Every gene is everywhere but the environment selects”: global geolocalization of gene sharing in environmental samples through network analysis
M Fondi, A Karkman, MV Tamminen, E Bosi, M Virta, R Fani, E Alm, ...
Genome biology and evolution 8 (5), 1388-1400, 2016
452016
Genomic analysis of three sponge-associated Arthrobacter Antarctic strains, inhibiting the growth of Burkholderia cepacia complex bacteria by synthesizing volatile organic …
V Orlandini, I Maida, M Fondi, E Perrin, MC Papaleo, E Bosi, ...
Microbiological research 169 (7-8), 593-601, 2014
342014
Ecology of cold environments: new insights of bacterial metabolic adaptation through an integrated genomic-phenomic approach
S Mocali, C Chiellini, A Fabiani, S Decuzzi, D de Pascale, E Parrilli, ...
Scientific reports 7 (1), 1-13, 2017
322017
Antagonistic interactions between endophytic cultivable bacterial communities isolated from the medicinal plant Echinacea purpurea
I Maida, C Chiellini, A Mengoni, E Bosi, F Firenzuoli, M Fondi, R Fani
Environmental microbiology 18 (8), 2357-2365, 2016
292016
Draft genome sequence of the fast-growing bacterium Vibrio natriegens strain DSMZ 759
I Maida, E Bosi, E Perrin, MC Papaleo, V Orlandini, M Fondi, R Fani, ...
Genome announcements 1 (4), 2013
282013
The pangenome of (Antarctic) Pseudoalteromonas bacteria: evolutionary and functional insights
E Bosi, M Fondi, V Orlandini, E Perrin, I Maida, D de Pascale, ML Tutino, ...
BMC genomics 18 (1), 93, 2017
272017
Draft genomes of three Antarctic Psychrobacter strains producing antimicrobial compounds against Burkholderia cepacia complex, opportunistic human pathogens
M Fondi, V Orlandini, E Perrin, I Maida, E Bosi, MC Papaleo, L Michaud, ...
Marine genomics 13, 37-38, 2014
202014
Perspectives and challenges in microbial communities metabolic modeling
E Bosi, G Bacci, A Mengoni, M Fondi
Frontiers in genetics 8, 88, 2017
192017
Preliminary data on antibacterial activity of Echinacea purpurea-associated bacterial communities against Burkholderia cepacia complex strains, opportunistic pathogens of …
C Chiellini, I Maida, V Maggini, E Bosi, S Mocali, G Emiliani, E Perrin, ...
Microbiological research 196, 34-43, 2017
182017
Modelling microbial metabolic rewiring during growth in a complex medium
M Fondi, E Bosi, L Presta, D Natoli, R Fani
BMC genomics 17 (1), 970, 2016
152016
Antimicrobial activity of Pseudoalteromonas strains isolated from the Ross Sea (Antarctica) versus cystic fibrosis opportunistic pathogens
I Maida, E Bosi, M Fondi, E Perrin, V Orlandini, MC Papaleo, A Mengoni, ...
Hydrobiologia 761 (1), 443-457, 2015
152015
The mosaicism of plasmids revealed by atypical genes detection and analysis
E Bosi, R Fani, M Fondi
BMC genomics 12 (1), 403, 2011
152011
Phenotypic and genomic characterization of the antimicrobial producer Rheinheimera sp. EpRS3 isolated from the medicinal plant Echinacea purpurea: insights into its …
L Presta, E Bosi, M Fondi, I Maida, E Perrin, E Miceli, V Maggini, P Bogani, ...
Research in microbiology 168 (3), 293-305, 2017
142017
Constraint-based modeling identifies new putative targets to fight colistin-resistant A. baumannii infections
L Presta, E Bosi, L Mansouri, L Dijkshoorn, R Fani, M Fondi
Scientific reports 7 (1), 1-12, 2017
122017
Genomic and phenotypic characterization of the species Acinetobacter venetianus
M Fondi, I Maida, E Perrin, V Orlandini, L La Torre, E Bosi, A Negroni, ...
Scientific reports 6 (1), 1-12, 2016
112016
Genome-scale phylogenetic and DNA composition analyses of Antarctic Pseudoalteromonas bacteria reveal inconsistencies in current taxonomic affiliation
E Bosi, M Fondi, I Maida, E Perrin, D de Pascale, ML Tutino, E Parrilli, ...
Hydrobiologia 761 (1), 85-95, 2015
102015
A systems biology view on bacterial response to temperature shift
M Fondi, E Bosi, AL Giudice, R Fani
Biotechnology of Extremophiles:, 597-618, 2016
92016
Defining orthologs and pangenome size metrics
E Bosi, R Fani, M Fondi
Bacterial Pangenomics, 191-202, 2015
72015
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Articles 1–20