Christophe Klopp
Christophe Klopp
Research engineer
Verified email at inra.fr
TitleCited byYear
The tomato genome sequence provides insights into fleshy fruit evolution
Tomato Genome Consortium
Nature 485 (7400), 635, 2012
19022012
The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates
C Berthelot, F Brunet, D Chalopin, A Juanchich, M Bernard, B Noël, ...
Nature communications 5, 3657, 2014
5192014
Whole-genome sequencing of 234 bulls facilitates mapping of monogenic and complex traits in cattle
HD Daetwyler, A Capitan, H Pausch, P Stothard, R Van Binsbergen, ...
Nature genetics 46 (8), 858, 2014
4622014
Metabolic adaptation to a high-fat diet is associated with a change in the gut microbiota
M Serino, E Luche, S Gres, A Baylac, M Bergé, C Cenac, A Waget, ...
Gut 61 (4), 543-553, 2012
3902012
The BioMart community portal: an innovative alternative to large, centralized data repositories
D Smedley, S Haider, S Durinck, L Pandini, P Provero, J Allen, O Arnaiz, ...
Nucleic acids research 43 (W1), W589-W598, 2015
3642015
An immune-related gene evolved into the master sex-determining gene in rainbow trout, Oncorhynchus mykiss
A Yano, R Guyomard, B Nicol, E Jouanno, E Quillet, C Klopp, C Cabau, ...
Current Biology 22 (15), 1423-1428, 2012
2932012
jvenn: an interactive Venn diagram viewer
P Bardou, J Mariette, F Escudié, C Djemiel, C Klopp
BMC bioinformatics 15 (1), 293, 2014
2652014
Involvement of tissue bacteria in the onset of diabetes in humans: evidence for a concept
J Amar, M Serino, C Lange, C Chabo, J Iacovoni, S Mondot, P Lepage, ...
Diabetologia 54 (12), 3055-3061, 2011
2192011
Functional metagenomics to mine the human gut microbiome for dietary fiber catabolic enzymes
L Tasse, J Bercovici, S Pizzut-Serin, P Robe, J Tap, C Klopp, BL Cantarel, ...
Genome research 20 (11), 1605-1612, 2010
1912010
Generation and analysis of a 29,745 unique Expressed Sequence Tags from the Pacific oyster (Crassostrea gigas) assembled into a publicly accessible database: the GigasDatabase
E Fleury, A Huvet, C Lelong, J De Lorgeril, V Boulo, Y Gueguen, ...
BMC genomics 10 (1), 341, 2009
1352009
Microbial ecology of the rumen evaluated by 454 GS FLX pyrosequencing is affected by starch and oil supplementation of diets
Z Asma, C Sylvie, C Laurent, M Jérôme, K Christophe, B Olivier, ...
FEMS microbiology ecology 83 (2), 504-514, 2013
1242013
Detection of haplotypes associated with prenatal death in dairy cattle and identification of deleterious mutations in GART, SHBG and SLC37A2
S Fritz, A Capitan, A Djari, SC Rodriguez, A Barbat, A Baur, C Grohs, ...
PloS one 8 (6), e65550, 2013
1192013
Design and characterization of a 52K SNP chip for goats
G Tosser-Klopp, P Bardou, O Bouchez, C Cabau, R Crooijmans, Y Dong, ...
PloS one 9 (1), e86227, 2014
1102014
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database
J Pasquier, C Cabau, T Nguyen, E Jouanno, D Severac, I Braasch, ...
BMC genomics 17 (1), 368, 2016
952016
De novo assembly of maritime pine transcriptome: implications for forest breeding and biotechnology
J Canales, R Bautista, P Label, J Gómez‐Maldonado, I Lesur, ...
Plant Biotechnology Journal 12 (3), 286-299, 2014
892014
Identification of large intergenic non-coding RNAs in bovine muscle using next-generation transcriptomic sequencing
C Billerey, M Boussaha, D Esquerré, E Rebours, A Djari, C Meersseman, ...
BMC genomics 15 (1), 499, 2014
822014
Bioinformatic analysis of ESTs collected by Sanger and pyrosequencing methods for a keystone forest tree species: oak
S Ueno, G Le Provost, V Léger, C Klopp, C Noirot, JM Frigerio, F Salin, ...
BMC genomics 11 (1), 650, 2010
822010
Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies
C Plomion, JM Aury, J Amselem, T Alaeitabar, V Barbe, C Belser, ...
Molecular ecology resources 16 (1), 254-265, 2016
812016
Attenuated sensing of SHH by Ptch1 underlies evolution of bovine limbs
J Lopez-Rios, A Duchesne, D Speziale, G Andrey, KA Peterson, ...
Nature 511 (7507), 46, 2014
692014
Transcriptome profiling of the feeding-to-fasting transition in chicken liver
C Désert, MJ Duclos, P Blavy, F Lecerf, F Moreews, C Klopp, M Aubry, ...
BMC genomics 9 (1), 611, 2008
692008
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Articles 1–20