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Philip Ashton
Philip Ashton
Malawi Liverpool Wellcome
Verified email at liverpool.ac.uk
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Cited by
Year
MinION nanopore sequencing identifies the position and structure of a bacterial antibiotic resistance island
PM Ashton, S Nair, T Dallman, S Rubino, W Rabsch, S Mwaigwisya, ...
Nature biotechnology 33 (3), 296-300, 2015
5232015
Rapid draft sequencing and real-time nanopore sequencing in a hospital outbreak of Salmonella
J Quick, P Ashton, S Calus, C Chatt, S Gossain, J Hawker, S Nair, K Neal, ...
Genome biology 16, 1-14, 2015
3232015
Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues
CJ Meehan, GA Goig, TA Kohl, L Verboven, A Dippenaar, M Ezewudo, ...
NATURE reviews microbiology 17 (9), 533-545, 2019
3122019
Detection of the plasmid-mediated mcr-1 gene conferring colistin resistance in human and food isolates of Salmonella enterica and Escherichia coli in England …
M Doumith, G Godbole, P Ashton, L Larkin, T Dallman, M Day, M Day, ...
Journal of Antimicrobial Chemotherapy 71 (8), 2300-2305, 2016
2952016
Intercontinental dissemination of azithromycin-resistant shigellosis through sexual transmission: a cross-sectional study
KS Baker, TJ Dallman, PM Ashton, M Day, G Hughes, PD Crook, ...
The Lancet infectious diseases 15 (8), 913-921, 2015
2532015
Identification of Salmonella for public health surveillance using whole genome sequencing
PM Ashton, S Nair, TM Peters, JA Bale, DG Powell, A Painset, R Tewolde, ...
PeerJ 4, e1752, 2016
2402016
Whole-Genome Sequencing for National Surveillance of Shiga Toxin–Producing Escherichia coli O157
TJ Dallman, L Byrne, PM Ashton, LA Cowley, NT Perry, G Adak, ...
Clinical Infectious Diseases 61 (3), 305-312, 2015
1902015
SnapperDB: a database solution for routine sequencing analysis of bacterial isolates
T Dallman, P Ashton, U Schafer, A Jironkin, A Painset, S Shaaban, ...
Bioinformatics 34 (17), 3028-3029, 2018
1672018
Prediction of phenotypic antimicrobial resistance profiles from whole genome sequences of non-typhoidal Salmonella enterica
S Neuert, S Nair, MR Day, M Doumith, KC Mellor, C Jenkins, G Godbole, ...
Frontiers in microbiology 9, 342801, 2018
1592018
Prospective use of whole genome sequencing (WGS) detected a multi-country outbreak of Salmonella Enteritidis
T Inns, PM Ashton, S Herrera-Leon, J Lighthill, S Foulkes, T Jombart, ...
Epidemiology & Infection 145 (2), 289-298, 2017
1332017
MOST: a modified MLST typing tool based on short read sequencing
R Tewolde, T Dallman, U Schaefer, CL Sheppard, P Ashton, B Pichon, ...
PeerJ 4, e2308, 2016
1182016
Applying phylogenomics to understand the emergence of Shiga-toxin-producing Escherichia coli O157:H7 strains causing severe human disease in the UK
TJ Dallman, PM Ashton, L Byrne, NT Perry, L Petrovska, R Ellis, L Allison, ...
Microbial Genomics 1 (3), e000029, 2015
1162015
Phylogenetic structure of European Salmonella Enteritidis outbreak correlates with national and international egg distribution network
T Dallman, T Inns, T Jombart, P Ashton, N Loman, C Chatt, ...
Microbial genomics 2 (8), e000070, 2016
862016
Public health surveillance in the UK revolutionises our understanding of the invasive Salmonella Typhimurium epidemic in Africa
PM Ashton, SV Owen, L Kaindama, WPM Rowe, CR Lane, L Larkin, ...
Genome medicine 9, 1-13, 2017
802017
Whole genome sequencing for the retrospective investigation of an outbreak of Salmonella Typhimurium DT 8
PM Ashton, T Peters, L Ameh, R McAleer, S Petrie, S Nair, I Muscat, ...
PLoS currents 7, 2015
722015
WGS for surveillance of antimicrobial resistance: a pilot study to detect the prevalence and mechanism of resistance to azithromycin in a UK population of non-typhoidal Salmonella
S Nair, P Ashton, M Doumith, S Connell, A Painset, S Mwaigwisya, ...
Journal of Antimicrobial Chemotherapy 71 (12), 3400-3408, 2016
642016
Whole genome sequencing for public health surveillance of Shiga toxin-producing Escherichia coli other than serogroup O157
MA Chattaway, TJ Dallman, C Jenkins
Frontiers in Microbiology 7, 186189, 2016
622016
Informal genomic surveillance of regional distribution of Salmonella Typhi genotypes and antimicrobial resistance via returning travellers
DJ Ingle, S Nair, H Hartman, PM Ashton, ZA Dyson, M Day, J Freedman, ...
PLoS neglected tropical diseases 13 (9), e0007620, 2019
612019
Comparative genomics of Cryptococcus neoformans var. grubii associated with meningitis in HIV infected and uninfected patients in Vietnam
JN Day, S Qihui, LT Thanh, PH Trieu, AD Van, NH Thu, TTH Chau, ...
PLoS neglected tropical diseases 11 (6), e0005628, 2017
592017
Whole genome sequencing reveals an outbreak of Salmonella Enteritidis associated with reptile feeder mice in the United Kingdom, 2012-2015
S Kanagarajah, A Waldram, G Dolan, C Jenkins, PM Ashton, AIC Martin, ...
Food Microbiology 71, 32-38, 2018
582018
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