Joanna Panecka-Hofman
Joanna Panecka-Hofman
Faculty of Physics, University of Warsaw
Verified email at uw.edu.pl
Title
Cited by
Cited by
Year
Allostery in its many disguises: from theory to applications
SJ Wodak, E Paci, NV Dokholyan, IN Berezovsky, A Horovitz, J Li, ...
Structure, 2019
432019
Molecular dynamics of potential rRNA binders: single-stranded nucleic acids and some analogues
J Panecka, C Mura, J Trylska
The journal of physical chemistry B 115 (3), 532-546, 2011
212011
TRAPP webserver: predicting protein binding site flexibility and detecting transient binding pockets
A Stank, DB Kokh, M Horn, E Sizikova, R Neil, J Panecka, S Richter, ...
Nucleic acids research 45 (W1), W325-W330, 2017
192017
Interplay of the bacterial ribosomal A-site, S12 protein mutations and paromomycin binding: a molecular dynamics study
J Panecka, C Mura, J Trylska
PloS one 9 (11), 2014
192014
Comparative mapping of on-targets and off-targets for the discovery of anti-trypanosomatid folate pathway inhibitors
J Panecka-Hofman, I Pöhner, F Spyrakis, T Zeppelin, F Di Pisa, LD Iacono, ...
Biochimica et Biophysica Acta (BBA)-General Subjects 1861 (12), 3215-3230, 2017
112017
Role of S-turn2 in the structure, dynamics, and function of mitochondrial ribosomal A-site. A bioinformatics and molecular dynamics simulation study
J Panecka, M Havrila, K Réblová, J Sponer, J Trylska
The Journal of Physical Chemistry B 118 (24), 6687-6701, 2014
112014
Accelerating drug discovery efforts for trypanosomatidic infections using an integrated transnational academic drug discovery platform
CB Moraes, G Witt, M Kuzikov, B Ellinger, T Calogeropoulou, KC Prousis, ...
SLAS DISCOVERY: Advancing Life Sciences R&D 24 (3), 346-361, 2019
82019
Application of a simple quantum chemical approach to ligand fragment scoring for Trypanosoma brucei pteridine reductase 1 inhibition
W Jedwabny, J Panecka-Hofman, E Dyguda-Kazimierowicz, RC Wade, ...
Journal of computer-aided molecular design 31 (8), 715-728, 2017
82017
Conformational dynamics of bacterial and human cytoplasmic models of the ribosomal A-site
J Panecka, J Šponer, J Trylska
Biochimie 112, 96-110, 2015
82015
Hits and Lead Discovery in the Identification of New Drugs against the Trypanosomatidic Infections
T Calogeropoulou, GE Magoulas, I Pöhner, J Panecka-Hofman, ...
Medicinal Chemistry of Neglected and Tropical Diseases: Advances in the …, 2019
12019
Molecular dynamics techniques in the studies of the bacterial ribosome
J Panecka, J Trylska
AIP Conference Proceedings 1456 (1), 207-214, 2012
12012
Exploring target flexibility for drug design
D Kokh, A Stank, M Horn, E Sizikova, R Neil, J Panecka, S Richter, ...
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 254, 2017
2017
Comparative mapping of on-targets and off-targets for the discovery of anti-trypanosomatid folate pathway inhibitors General subjects
J Panecka-Hofman, I Pöhner, F Spyrakis, T Zeppelin, F Di Pisa, ...
2017
Dynamical properties of the ribosomal decoding site and its complexes with antibiotics
J Panecka
2015
Mutations in the Bacterial Ribosomal Protein S12 Influence Aminoglycoside Antibiotic And Ribosome Dynamics
J Panecka, C Mura, J Trylska
PROTEIN SCIENCE 23, 241-242, 2014
2014
Comparing the dynamics of the bacterial and human ribosomal A-site
J Panecka, K Reblova, M Kara, M Zacharias, J Sponer, J Trylska
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 245, 2013
2013
Targeting bacterial ribosomal RNA [p][p][p][p]
J Trylska, J Romanowska, T Witula, S Thoduka, Z Dabrowska, M Jasinski, ...
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 243, 2012
2012
Supporting Information for Interplay of the bacterial ribosomal A-site, S12 protein mutations and paromomycin binding: A molecular dynamics study
J Panecka, C Mura, J Trylska
The system can't perform the operation now. Try again later.
Articles 1–18