| Detection of temperature difference in neuronal cells R Tanimoto, T Hiraiwa, Y Nakai, Y Shindo, K Oka, N Hiroi, A Funahashi Scientific reports 6 (1), 1-10, 2016 | 91 | 2016 |
| High-speed microscopy with an electrically tunable lens to image the dynamics of in vivo molecular complexes Y Nakai, M Ozeki, T Hiraiwa, R Tanimoto, A Funahashi, N Hiroi, ... Review of Scientific Instruments 86 (1), 013707, 2015 | 51 | 2015 |
| Mammalian Rcd1 is a novel transcriptional cofactor that mediates retinoic acid-induced cell differentiation N Hiroi, T Ito, H Yamamoto, T Ochiya, S Jinno, H Okayama The EMBO journal 21 (19), 5235-5244, 2002 | 48 | 2002 |
| The systems biology simulation core algorithm R Keller, A Dörr, A Tabira, A Funahashi, MJ Ziller, R Adams, N Rodriguez, ... BMC systems biology 7 (1), 1-16, 2013 | 43 | 2013 |
| The role of feedback control mechanisms on the establishment of oscillatory regimes in the Ras/cAMP/PKA pathway in S. cerevisiae. D Besozzi, P Cazzaniga, D Pescini, G Mauri, S Colombo, E Martegani EURASIP J. Bioinformatics and Systems Biology 2012, 10, 2012 | 43 | 2012 |
| COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms M Ostaszewski, A Niarakis, A Mazein, I Kuperstein, R Phair, ... Mol Syst Biol 17 (10), e10387, 2021 | 28 | 2021 |
| A proteomic study of mitotic phase-specific interactors of EB1 reveals a role for SXIP-mediated protein interactions in anaphase onset N Tamura, JE Simon, A Nayak, R Shenoy, N Hiroi, V Boilot, A Funahashi, ... Biology open 4 (2), 155-169, 2015 | 27 | 2015 |
| Automated tracking of mitotic spindle pole positions shows that LGN is required for spindle rotation but not orientation maintenance AM Corrigan, RL Shrestha, I Zulkipli, N Hiroi, Y Liu, N Tamura, B Yang, ... Cell Cycle 12 (16), 2643-2655, 2013 | 27 | 2013 |
| FPGA implementation of a data-driven stochastic biochemical simulator with the next reaction method M Yoshimi, Y Iwaoka, Y Nishikawa, T Kojima, Y Osana, A Funahashi, ... 2007 International Conference on Field Programmable Logic and Applications …, 2007 | 27 | 2007 |
| Power reduction techniques for dynamically reconfigurable processor arrays T Nishimura, K Hirai, Y Saito, T Nakamura, Y Hasegawa, S Tsutsusmi, ... 2008 International Conference on Field Programmable Logic and Applications …, 2008 | 25 | 2008 |
| 3D convolutional neural networks-based segmentation to acquire quantitative criteria of the nucleus during mouse embryogenesis AF Yuta Tokuoka, Takahiro G. Yamada, Daisuke Mashiko, Zenki Ikeda, Noriko F ... npj systems biology and applications 6, 12, 2020 | 22* | 2020 |
| Acceleration of discrete stochastic biochemical simulation using GPGPU K Sumiyoshi, K Hirata, N Hiroi, A Funahashi Frontiers in physiology 6, 42, 2015 | 21 | 2015 |
| LibSBMLSim: a reference implementation of fully functional SBML simulator H Takizawa, K Nakamura, A Tabira, Y Chikahara, T Matsui, N Hiroi, ... Bioinformatics 29 (11), 1474-1476, 2013 | 21 | 2013 |
| Comparative studies of suppression of malignant cancer cell phenotype by antisense oligo DNA and small interfering RNA N Hiroi, A Funahashi, H Kitano Cancer gene therapy 13 (1), 7, 2006 | 18 | 2006 |
| Keio University N Hiroi Japan, 0 | 18 | |
| Efficient scheduling of rate law functions for ODE-based multimodel biochemical simulation on an FPGA N Iwanaga, Y Shibata, M Yoshimi, Y Osana, Y Iwaoka, T Fukushima, ... International Conference on Field Programmable Logic and Applications, 2005 …, 2005 | 17 | 2005 |
| Predicting the future direction of cell movement with convolutional neural networks S Nishimoto, Y Tokuoka, TG Yamada, NF Hiroi, A Funahashi PloS one 14 (9), e0221245, 2019 | 15 | 2019 |
| An FPGA implementation of high throughput stochastic simulator for large-scale biochemical systems M Yoshimi, Y Osana, Y Iwaoka, Y Nishikawa, T Kojima, A Funahashi, ... 2006 International Conference on Field Programmable Logic and Applications, 1-6, 2006 | 14 | 2006 |
| Convolutional neural network-based instance segmentation algorithm to acquire quantitative criteria of early mouse development Y Tokuoka, TG Yamada, NF Hiroi, TJ Kobayashi, K Yamagata, ... BioRxiv, 324186, 2018 | 13 | 2018 |
| Quantifying periodicity in omics data N Hiroi, S Nayak, M Krantz | 13* | 2014 |
Akira FunahashiProfessor of Systems Biology, Keio UniversityVerified email at bio.keio.ac.jp
