Phil Ewels
Phil Ewels
Bioinformatician, NGI Applications, Science for Life Laboratory, Stockholm
Verified email at scilifelab.se - Homepage
TitleCited byYear
MultiQC: summarize analysis results for multiple tools and samples in a single report
P Ewels, M Magnusson, S Lundin, M Käller
Bioinformatics 32 (19), 3047-3048, 2016
4772016
Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C
B Mifsud, F Tavares-Cadete, AN Young, R Sugar, S Schoenfelder, ...
Nature genetics 47 (6), 598, 2015
4672015
Genetic determinants of ulcerative colitis include the ECM1 locus and five loci implicated in Crohn's disease
SA Fisher, M Tremelling, CA Anderson, R Gwilliam, S Bumpstead, ...
Nature genetics 40 (6), 710, 2008
4502008
HiCUP: pipeline for mapping and processing Hi-C data
S Wingett, P Ewels, M Furlan-Magaril, T Nagano, S Schoenfelder, ...
F1000Research 4, 2015
1582015
Large scale association analysis of novel genetic loci for coronary artery disease
Coronary Artery Disease Consortium
Arteriosclerosis, thrombosis, and vascular biology 29 (5), 774-780, 2009
1572009
Global reorganization of the nuclear landscape in senescent cells
T Chandra, PA Ewels, S Schoenfelder, M Furlan-Magaril, SW Wingett, ...
Cell reports 10 (4), 471-483, 2015
1412015
Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
S Patalano, A Vlasova, C Wyatt, P Ewels, F Camara, PG Ferreira, ...
Proceedings of the National Academy of Sciences 112 (45), 13970-13975, 2015
1092015
Sorting nexin-1 defines an early phase of Salmonella-containing vacuole-remodeling during Salmonella infection
MV Bujny, PA Ewels, S Humphrey, N Attar, MA Jepson, PJ Cullen
Journal of cell science 121 (12), 2027-2036, 2008
892008
High-throughput genotyping of Salmonella enterica serovar Typhi allowing geographical assignment of haplotypes and pathotypes within an urban District of Jakarta, Indonesia
S Baker, K Holt, E Van de Vosse, P Roumagnac, S Whitehead, E King, ...
Journal of clinical microbiology 46 (5), 1741-1746, 2008
752008
Understanding functional miRNA–target interactions in vivo by site-specific genome engineering
AR Bassett, G Azzam, L Wheatley, C Tibbit, T Rajakumar, S McGowan, ...
Nature communications 5, 4640, 2014
572014
A Complete Overhaul of the Electron Energy-Loss Spectroscopy and X-Ray Absorption Spectroscopy Database: eelsdb.eu
P Ewels, T Sikora, V Serin, CP Ewels, L Lajaunie
Microscopy and Microanalysis, 1-8, 2016
442016
Transcriptomics and methylomics of CD4-positive T cells in arsenic-exposed women
K Engström, TK Wojdacz, F Marabita, P Ewels, M Käller, F Vezzi, ...
Archives of toxicology 91 (5), 2067-2078, 2017
132017
Single base resolution analysis of 5-hydroxymethylcytosine in 188 human genes: implications for hepatic gene expression
M Ivanov, M Kals, V Lauschke, I Barragan, P Ewels, M Käller, T Axelsson, ...
Nucleic acids research 44 (14), 6756-6769, 2016
112016
Meet the neighbours: tools to dissect nuclear structure and function
CS Osborne, PA Ewels, ANC Young
Briefings in functional genomics 10 (1), 11-17, 2011
102011
FastQC: High Throughput sequence QC report v. 0.10. 1
S Andrews, P Lindenbaum, B Howard, P Ewels
Cambridge, UK: Babraham Bioinformatics, 2011
82011
Cluster Flow: A user-friendly bioinformatics workflow tool
P Ewels, F Krueger, M Käller, S Andrews
F1000Research 5, 2016
72016
nf-core: Community curated bioinformatics pipelines
PA Ewels, A Peltzer, S Fillinger, J Alneberg, H Patel, A Wilm, MU Garcia, ...
bioRxiv, 610741, 2019
12019
New version of the EELS database: eelsdb. eu
P Ewels, T Sikora, V Serin, CP Ewels, L Lajaunie
European Microscopy Congress 2016: Proceedings, 919-920, 2016
12016
Analysis of genome sequencing data with a minimal investment IT-infrastructure
J Alneberg, MU Garcia, A Peltzer, T Koch, M Proks, A Wilm, PA Ewels
EUROPEAN JOURNAL OF HUMAN GENETICS 27, 1706-1706, 2019
2019
MultiQC: visualising results from common bioinformatics tools
P Ewels, M Käller
F1000Research 6, 2017
2017
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Articles 1–20