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Ana Conesa
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Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research
A Conesa, S Götz, JM García-Gómez, J Terol, M Talón, M Robles
Bioinformatics 21 (18), 3674-3676, 2005
104112005
Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research
A Conesa, S Götz, JM García-Gómez, J Terol, M Talón, M Robles
Bioinformatics 21 (18), 3674-3676, 2005
104112005
High-throughput functional annotation and data mining with the Blast2GO suite
S Götz, JM García-Gómez, J Terol, TD Williams, SH Nagaraj, MJ Nueda, ...
Nucleic acids research 36 (10), 3420-3435, 2008
34812008
A survey of best practices for RNA-seq data analysis
A Conesa, P Madrigal, S Tarazona, D Gomez-Cabrero, A Cervera, ...
Genome biology 17 (1), 1-19, 2016
21632016
Blast2GO: a comprehensive suite for functional analysis in plant genomics
A Conesa, S Götz
International journal of plant genomics 2008, 2008
19472008
Differential expression in RNA-seq: a matter of depth
S Tarazona, F García-Alcalde, J Dopazo, A Ferrer, A Conesa
Genome research 21 (12), 2213-2223, 2011
14412011
Qualimap 2: advanced multi-sample quality control for high-throughput sequencing data
K Okonechnikov, A Conesa, F García-Alcalde
Bioinformatics 32 (2), 292-294, 2016
9462016
A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium
Nature biotechnology 32 (9), 903-914, 2014
7202014
Qualimap: evaluating next-generation sequencing alignment data
F García-Alcalde, K Okonechnikov, J Carbonell, LM Cruz, S Götz, ...
Bioinformatics 28 (20), 2678-2679, 2012
6832012
Filamentous fungi as cell factories for heterologous protein production
PJ Punt, N van Biezen, A Conesa, A Albers, J Mangnus, ...
Trends in biotechnology 20 (5), 200-206, 2002
5552002
Data quality aware analysis of differential expression in RNA-seq with NOISeq R/Bioc package
S Tarazona, P Furió-Tarí, D Turrŕ, AD Pietro, MJ Nueda, A Ferrer, ...
Nucleic acids research 43 (21), e140-e140, 2015
5042015
Data integration in the era of omics: current and future challenges
D Gomez-Cabrero, I Abugessaisa, D Maier, A Teschendorff, ...
BMC systems biology 8 (2), 1-10, 2014
3932014
maSigPro: a method to identify significantly differential expression profiles in time-course microarray experiments
A Conesa, MJ Nueda, A Ferrer, M Talón
Bioinformatics 22 (9), 1096-1102, 2006
3912006
Initial genomics of the human nucleolus
A Németh, A Conesa, J Santoyo-Lopez, I Medina, D Montaner, B Péterfia, ...
PLoS genetics 6 (3), e1000889, 2010
3772010
Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling
I Medina, J Carbonell, L Pulido, SC Madeira, S Goetz, A Conesa, ...
Nucleic acids research 38 (suppl_2), W210-W213, 2010
3572010
The secretion pathway in filamentous fungi: a biotechnological view
A Conesa, PJ Punt, N van Luijk, CA van den Hondel
Fungal Genetics and Biology 33 (3), 155-171, 2001
3302001
Making sense of big data in health research: towards an EU action plan
C Auffray, R Balling, I Barroso, L Bencze, M Benson, J Bergeron, ...
Genome medicine 8 (1), 1-13, 2016
2482016
Fungal peroxidases: molecular aspects and applications
A Conesa, PJ Punt, CA van den Hondel
Journal of Biotechnology 93 (2), 143-158, 2002
2372002
Next maSigPro: updating maSigPro bioconductor package for RNA-seq time series
MJ Nueda, S Tarazona, A Conesa
Bioinformatics 30 (18), 2598-2602, 2014
2262014
SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification
M Tardaguila, L De La Fuente, C Marti, C Pereira, FJ Pardo-Palacios, ...
Genome research 28 (3), 396-411, 2018
1792018
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