Ana Conesa
Ana Conesa
Microbiology and Cell Science Department, University of Florida
Verified email at ufl.edu
TitleCited byYear
Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research
A Conesa, S Götz, JM García-Gómez, J Terol, M Talón, M Robles
Bioinformatics 21 (18), 3674-3676, 2005
77732005
Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research
A Conesa, S Götz, JM García-Gómez, J Terol, M Talón, M Robles
Bioinformatics 21 (18), 3674-3676, 2005
77732005
High-throughput functional annotation and data mining with the Blast2GO suite
S Götz, JM García-Gómez, J Terol, TD Williams, SH Nagaraj, MJ Nueda, ...
Nucleic acids research 36 (10), 3420-3435, 2008
22212008
Blast2GO: A comprehensive suite for functional analysis in plant genomics
A Conesa, S Götz
International journal of plant genomics 2008, 2008
13972008
Differential expression in RNA-seq: a matter of depth
S Tarazona, F García-Alcalde, J Dopazo, A Ferrer, A Conesa
Genome research 21 (12), 2213-2223, 2011
10312011
A survey of best practices for RNA-seq data analysis
A Conesa, P Madrigal, S Tarazona, D Gomez-Cabrero, A Cervera, ...
Genome biology 17 (1), 13, 2016
10012016
Filamentous fungi as cell factories for heterologous protein production
PJ Punt, N van Biezen, A Conesa, A Albers, J Mangnus, ...
Trends in biotechnology 20 (5), 200-206, 2002
4712002
A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium
Z Su, PP Łabaj, S Li, J Thierry-Mieg, D Thierry-Mieg, W Shi, C Wang, ...
Nature biotechnology 32 (9), 903, 2014
4582014
Qualimap: evaluating next-generation sequencing alignment data
F García-Alcalde, K Okonechnikov, J Carbonell, LM Cruz, S Götz, ...
Bioinformatics 28 (20), 2678-2679, 2012
3492012
Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling
I Medina, J Carbonell, L Pulido, SC Madeira, S Goetz, A Conesa, ...
Nucleic acids research 38 (suppl_2), W210-W213, 2010
3302010
Qualimap 2: advanced multi-sample quality control for high-throughput sequencing data
K Okonechnikov, A Conesa, F García-Alcalde
Bioinformatics 32 (2), 292-294, 2015
2982015
maSigPro: a method to identify significantly differential expression profiles in time-course microarray experiments
A Conesa, MJ Nueda, A Ferrer, M Talón
Bioinformatics 22 (9), 1096-1102, 2006
2912006
The secretion pathway in filamentous fungi: a biotechnological view
A Conesa, PJ Punt, N van Luijk, CA van den Hondel
Fungal Genetics and Biology 33 (3), 155-171, 2001
2862001
Data integration in the era of omics: current and future challenges
D Gomez-Cabrero, I Abugessaisa, D Maier, A Teschendorff, ...
BMC systems biology 8 (2), I1, 2014
2702014
Initial genomics of the human nucleolus
A Németh, A Conesa, J Santoyo-Lopez, I Medina, D Montaner, B Péterfia, ...
PLoS genetics 6 (3), e1000889, 2010
2622010
Data quality aware analysis of differential expression in RNA-seq with NOISeq R/Bioc package
S Tarazona, P Furió-Tarí, D Turra, AD Pietro, MJ Nueda, A Ferrer, ...
Nucleic acids research 43 (21), e140-e140, 2015
2062015
Fungal peroxidases: molecular aspects and applications
A Conesa, PJ Punt, CA van den Hondel
Journal of Biotechnology 93 (2), 143-158, 2002
1972002
Development of a citrus genome-wide EST collection and cDNA microarray as resources for genomic studies
J Forment, J Gadea, L Huerta, L Abizanda, J Agusti, S Alamar, E Alos, ...
Plant molecular biology 57 (3), 375-391, 2005
1552005
Studies on the Production of Fungal Peroxidases inAspergillus niger
A Conesa, CA van den Hondel, PJ Punt
Appl. Environ. Microbiol. 66 (7), 3016-3023, 2000
1452000
Making sense of big data in health research: towards an EU action plan
C Auffray, R Balling, I Barroso, L Bencze, M Benson, J Bergeron, ...
Genome medicine 8 (1), 71, 2016
1292016
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