Isheng Jason Tsai
Isheng Jason Tsai
Biodiversity research center, Academia Sinica
Verified email at gate.sinica.edu.tw - Homepage
TitleCited byYear
Population genomics of domestic and wild yeasts
G Liti, DM Carter, AM Moses, J Warringer, L Parts, SA James, RP Davey, ...
Nature 458 (7236), 337, 2009
11792009
The genomes of four tapeworm species reveal adaptations to parasitism
IJ Tsai, M Zarowiecki, N Holroyd, A Garciarrubio, A Sanchez-Flores, ...
Nature 496 (7443), 57, 2013
4212013
Improving draft assemblies by iterative mapping and assembly of short reads to eliminate gaps
IJ Tsai, TD Otto, M Berriman
Genome biology 11 (4), R41, 2010
2722010
A systematically improved high quality genome and transcriptome of the human blood fluke Schistosoma mansoni
AV Protasio, IJ Tsai, A Babbage, S Nichol, M Hunt, MA Aslett, N De Silva, ...
PLoS neglected tropical diseases 6 (1), e1455, 2012
2692012
Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus
T Kikuchi, JA Cotton, JJ Dalzell, K Hasegawa, N Kanzaki, P McVeigh, ...
PLoS pathogens 7 (9), e1002219, 2011
2522011
Population genomics of the wild yeast Saccharomyces paradoxus: quantifying the life cycle
IJ Tsai, D Bensasson, A Burt, V Koufopanou
Proceedings of the National Academy of Sciences 105 (12), 4957-4962, 2008
2432008
The genome and transcriptome of Haemonchus contortus, a key model parasite for drug and vaccine discovery
R Laing, T Kikuchi, A Martinelli, IJ Tsai, RN Beech, E Redman, N Holroyd, ...
Genome biology 14 (8), R88, 2013
1762013
A post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs
MT Swain, IJ Tsai, SA Assefa, C Newbold, M Berriman, TD Otto
Nature protocols 7 (7), 1260, 2012
1662012
The genome and life-stage specific transcriptomes of Globodera pallida elucidate key aspects of plant parasitism by a cyst nematode
JA Cotton, CJ Lilley, LM Jones, T Kikuchi, AJ Reid, P Thorpe, IJ Tsai, ...
Genome biology 15 (3), R43, 2014
1292014
The genomic basis of parasitism in the Strongyloides clade of nematodes
VL Hunt, IJ Tsai, A Coghlan, AJ Reid, N Holroyd, BJ Foth, A Tracey, ...
Nature genetics 48 (3), 299, 2016
872016
Whipworm genome and dual-species transcriptome analyses provide molecular insights into an intimate host-parasite interaction
BJ Foth, IJ Tsai, AJ Reid, AJ Bancroft, S Nichol, A Tracey, N Holroyd, ...
Nature genetics 46 (7), 693, 2014
712014
Conservation of recombination hotspots in yeast
IJ Tsai, A Burt, V Koufopanou
Proceedings of the National Academy of Sciences 107 (17), 7847-7852, 2010
602010
Conversion from mouse embryonic to extra-embryonic endoderm stem cells reveals distinct differentiation capacities of pluripotent stem cell states
LTY Cho, SE Wamaitha, IJ Tsai, J Artus, RI Sherwood, RA Pedersen, ...
Development, 2012
572012
Germline transgenesis and insertional mutagenesis in Schistosoma mansoni mediated by murine leukemia virus
G Rinaldi, SE Eckert, IJ Tsai, S Suttiprapa, KJ Kines, JF Tort, VH Mann, ...
PLoS pathogens 8 (7), e1002820, 2012
502012
The genome of Onchocerca volvulus, agent of river blindness
JA Cotton, S Bennuru, A Grote, B Harsha, A Tracey, R Beech, SR Doyle, ...
Nature microbiology 2 (2), 16216, 2017
352017
Distribution and evolution of glycoside hydrolase family 45 cellulases in nematodes and fungi
JE Palomares-Rius, Y Hirooka, IJ Tsai, H Masuya, A Hino, N Kanzaki, ...
BMC evolutionary biology 14 (1), 69, 2014
282014
The genome of the sparganosis tapeworm Spirometra erinaceieuropaei isolated from the biopsy of a migrating brain lesion
HM Bennett, HP Mok, E Gkrania-Klotsas, IJ Tsai, EJ Stanley, NM Antoun, ...
Genome biology 15 (11), 510, 2014
242014
Assessment of helminth biodiversity in wild rats using 18S rDNA based metagenomics
R Tanaka, A Hino, IJ Tsai, JE Palomares-Rius, A Yoshida, Y Ogura, ...
PLoS One 9 (10), e110769, 2014
202014
Comparative genomics of the major parasitic worms
International Helminth Genomes Consortium
Nature genetics 51 (1), 163, 2019
152019
Comparative Genomics of Taphrina Fungi Causing Varying Degrees of Tumorous Deformity in Plants
IJ Tsai, E Tanaka, H Masuya, R Tanaka, Y Hirooka, R Endoh, N Sahashi, ...
Genome biology and evolution 6 (4), 861-872, 2014
132014
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