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Guido Scarabelli
Guido Scarabelli
Verified email at schrodinger.com
Title
Cited by
Cited by
Year
Integrating protein structural dynamics and evolutionary analysis with Bio3D
L Skjærven, XQ Yao, G Scarabelli, BJ Grant
BMC bioinformatics 15, 1-11, 2014
3462014
A structural model for microtubule minus-end recognition and protection by CAMSAP proteins
J Atherton, K Jiang, MM Stangier, Y Luo, S Hua, K Houben, JJE Van Hooff, ...
Nature structural & molecular biology 24 (11), 931-943, 2017
972017
Predicting interaction sites from the energetics of isolated proteins: a new approach to epitope mapping
G Scarabelli, G Morra, G Colombo
Biophysical journal 98 (9), 1966-1975, 2010
852010
Kinesin-5 allosteric inhibitors uncouple the dynamics of nucleotide, microtubule, and neck-linker binding sites
G Scarabelli, BJ Grant
Biophysical journal 107 (9), 2204-2213, 2014
582014
Mapping the structural and dynamical features of kinesin motor domains
G Scarabelli, BJ Grant
PLoS computational biology 9 (11), e1003329, 2013
572013
Structural determinants of the unusual helix stability of a de novo engineered vascular endothelial growth factor (VEGF) mimicking peptide (2008) Chem
D Diana, B Ziaco, G Colombo, G Scarabelli, A Romanelli, C Pedone, ...
Eur. J 14, 4164-4166, 2008
532008
Exploiting antigenic diversity for vaccine design: the chlamydia ArtJ paradigm
M Soriani, P Petit, R Grifantini, R Petracca, G Gancitano, E Frigimelica, ...
Journal of biological chemistry 285 (39), 30126-30138, 2010
502010
Neck linker docking is critical for Kinesin-1 force generation in cells but at a cost to motor speed and processivity
BG Budaitis, S Jariwala, DN Reinemann, KI Schimert, G Scarabelli, ...
Elife 8, e44146, 2019
352019
Mapping the processivity determinants of the kinesin-3 motor domain
G Scarabelli, V Soppina, XQ Yao, J Atherton, CA Moores, KJ Verhey, ...
Biophysical Journal 109 (8), 1537-1540, 2015
322015
Mapping the processivity determinants of the kinesin-3 motor domain
G Scarabelli, V Soppina, XQ Yao, J Atherton, CA Moores, KJ Verhey, ...
Biophysical Journal 109 (8), 1537-1540, 2015
322015
A posttranslational modification of the mitotic kinesin Eg5 that enhances its mechanochemical coupling and alters its mitotic function
JM Muretta, BJN Reddy, G Scarabelli, AF Thompson, S Jariwala, J Major, ...
Proceedings of the National Academy of Sciences 115 (8), E1779-E1788, 2018
312018
Structural analysis of a helical peptide unfolding pathway
D Diana, B Ziaco, G Scarabelli, C Pedone, G Colombo, LD D'Andrea, ...
Chemistry–A European Journal 16 (18), 5400-5407, 2010
312010
The maximal and current accuracy of rigorous protein-ligand binding free energy calculations
GA Ross, C Lu, G Scarabelli, SK Albanese, E Houang, R Abel, ED Harder, ...
Communications Chemistry 6 (1), 222, 2023
122023
Accurate prediction of protein thermodynamic stability changes upon residue mutation using free energy perturbation
G Scarabelli, EO Oloo, JKX Maier, A Rodriguez-Granillo
Journal of Molecular Biology 434 (2), 167375, 2022
112022
Bioactive conformations of two seminal delta opioid receptor penta‐peptides inferred from free‐energy profiles
G Scarabelli, D Provasi, A Negri, M Filizola
Biopolymers 101 (1), 21-27, 2014
92014
Structure and sequence determinants of aggregation investigated with molecular dynamics
E Moroni, G Scarabelli, G Colombo
Front Biosci (Landmark Ed) 14, 523-539, 2009
92009
The Bio3D package: new interactive tools for structural bioinformatics
XQ Yao, G Scarabelli, L Skjærven, BJ Grant
Biophysical Journal 106 (2), 406a, 2014
32014
Enhanced normal modes analysis with Bio3D
L Skjaerven, XQ Yao, G Scarabelli, BJ Grant
22016
Author Correction: A structural model for microtubule minus-end recognition and protection by CAMSAP proteins
J Atherton, K Jiang, MM Stangier, Y Luo, S Hua, K Houben, JJE van Hooff, ...
Nature structural & molecular biology 27 (6), 603-603, 2020
12020
Protein structure networks with Bio3D
X Yao, G Scarabelli, L Skjaerven, BJ Grant
Grantlab, Manassas, VA, 1-22, 2015
12015
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