M. Azim Ansari
TitleCited byYear
Microevolutionary analysis of Clostridium difficile genomes to investigate transmission
X Didelot, DW Eyre, M Cule, CL Ip, MA Ansari, D Griffiths, A Vaughan, ...
Genome Biology 13 (12), R118, 2012
1532012
Recombinational switching of the Clostridium difficile S-layer and a novel glycosylation gene cluster revealed by large-scale whole-genome sequencing
KE Dingle, X Didelot, MA Ansari, DW Eyre, A Vaughan, D Griffiths, CLC Ip, ...
Journal of Infectious Diseases 207 (4), 675–686, 2013
682013
Comparison of next-generation sequencing technologies for comprehensive assessment of full-length hepatitis C viral genomes
E Thomson, CLC Ip, A Badhan, MT Christiansen, W Adamson, MA Ansari, ...
Journal of clinical microbiology 54 (10), 2470-2484, 2016
562016
Efficient inference of recombination hot regions in bacterial genomes
K Yahara, X Didelot, MA Ansari, SK Sheppard, D Falush
Molecular biology and evolution 31 (6), 1593-1605, 2014
472014
Genome-to-genome analysis highlights the effect of the human innate and adaptive immune systems on the hepatitis C virus
MA Ansari, V Pedergnana, CLC Ip, A Magri, A Von Delft, D Bonsall, ...
Nature genetics 49 (5), 666, 2017
442017
Evolutionary dynamics of Enterococcus faecium reveals complex genomic relationships between isolates with independent emergence of vancomycin resistance.
SJ van Hal, CLC Ip, MA Ansari, DJ Wilson, B Espedido, SO Jensen, ...
Microbial Genomics, 2015
372015
Genomic epidemiology reconstructs the introduction and spread of Zika virus in Central America and Mexico
J Thézé, T Li, L du Plessis, J Bouquet, MUG Kraemer, S Somasekar, G Yu, ...
Cell host & microbe, 2018
332018
Inference of the properties of the recombination process from whole bacterial genomes
MA Ansari, X Didelot
Genetics 196 (1), 253-265, 2014
302014
ve-SEQ: Robust, unbiased enrichment for streamlined detection and whole-genome sequencing of HCV and other highly diverse pathogens
D Bonsall, MA Ansari, C Ip, A Trebes, A Brown, P Klenerman, D Buck, ...
F1000Research 4 (1062), 2015
272015
Evaluation of viremia frequencies of a novel human pegivirus by using bioinformatic screening and PCR
D Bonsall, WF Gregory, CLC Ip, S Donfield, J Iles, MA Ansari, P Piazza, ...
Emerging infectious diseases 22 (4), 671, 2016
212016
Resistance analysis of genotype 3 hepatitis C virus indicates subtypes inherently resistant to nonstructural protein 5A inhibitors
D Smith, A Magri, D Bonsall, CLC Ip, A Trebes, A Brown, P Piazza, ...
Hepatology 69 (5), 1861-1872, 2019
17*2019
Bayesian inference of the evolution of a phenotype distribution on a phylogenetic tree
MA Ansari, X Didelot
Genetics 204 (1), 89-98, 2016
172016
Highly-immunogenic virally-vectored T-cell vaccines cannot overcome subversion of the T-cell response by HCV during chronic infection
L Swadling, J Halliday, C Kelly, A Brown, S Capone, M Ansari, D Bonsall, ...
Vaccines 4 (3), 27, 2016
162016
HBV vaccination and PMTCT as elimination tools in the presence of HIV: insights from a clinical cohort and dynamic model
AL McNaughton, J Lourenço, L Hattingh, E Adland, S Daniels, A Van Zyl, ...
BMC medicine 17 (1), 43, 2019
10*2019
Insights from deep sequencing of the HBV genome—unique, tiny, and misunderstood
AL McNaughton, V D'Arienzo, MA Ansari, SF Lumley, M Littlejohn, ...
Gastroenterology, 2018
102018
Role of HIV-specific CD8+ T cells in pediatric HIV cure strategies after widespread early viral escape
EM Leitman, CF Thobakgale, E Adland, MA Ansari, J Raghwani, ...
Journal of Experimental Medicine, jem. 20162123, 2017
72017
Impact of I nterferon L ambda 4 G enotype on I nterferon‐S timulated G ene E xpression D uring D irect‐A cting A ntiviral T herapy for H epatitis C
N Ramamurthy, E Marchi, MA Ansari, V Pedergnana, A Mclean, E Hudson, ...
Hepatology 68 (3), 859-871, 2018
42018
Evidence of CD4+ T cell-mediated immune pressure on the Hepatitis C virus genome
M Lucas, P Deshpande, I James, A Rauch, K Pfafferott, E Gaylard, ...
Scientific Reports (Nature Publisher Group) 8, 1-10, 2018
42018
Amino Acid Substitutions in Genotype 3a Hepatitis C Virus Polymerase Protein Affect Responses to Sofosbuvir
PAC Wing, M Jones, M Cheung, S DaSilva, C Bamford, WYJ Lee, ...
Gastroenterology, 2019
32019
Illumina and Nanopore methods for whole genome sequencing of hepatitis B virus (HBV)
AL McNaughton, HE Roberts, D Bonsall, M de Cesare, J Mokaya, ...
Scientific Reports 9 (1), 7081, 2019
32019
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Articles 1–20