| Single-cell transcriptomics of regulatory T cells reveals trajectories of tissue adaptation RJ Miragaia, T Gomes, A Chomka, L Jardine, A Riedel, AN Hegazy, ... Immunity 50 (2), 493-504. e7, 2019 | 426 | 2019 |
| BraCeR: B-cell-receptor reconstruction and clonality inference from single-cell RNA-seq I Lindeman, G Emerton, L Mamanova, O Snir, K Polanski, SW Qiao, ... Nature methods 15 (8), 563-565, 2018 | 96 | 2018 |
| Mosaic deletion patterns of the human antibody heavy chain gene locus shown by Bayesian haplotyping M Gidoni, O Snir, A Peres, P Polak, I Lindeman, I Mikocziova, VK Sarna, ... Nature communications 10 (1), 628, 2019 | 88 | 2019 |
| Genetic analysis of Ikaros target genes and tumor suppressor function in BCR-ABL1+ pre–B ALL H Schjerven, EF Ayongaba, A Aghajanirefah, J McLaughlin, D Cheng, ... Journal of Experimental Medicine 214 (3), 793-814, 2017 | 41 | 2017 |
| Polymorphisms in human immunoglobulin heavy chain variable genes and their upstream regions I Mikocziova, M Gidoni, I Lindeman, A Peres, O Snir, G Yaari, LM Sollid Nucleic Acids Research 48 (10), 5499-5510, 2020 | 33 | 2020 |
| Longevity, clonal relationship, and transcriptional program of celiac disease–specific plasma cells I Lindeman, C Zhou, LM Eggesbø, Z Miao, J Polak, KEA Lundin, ... Journal of Experimental Medicine 218 (2), e20200852, 2020 | 27 | 2020 |
| Stereotyped B-cell responses are linked to IgG constant region polymorphisms in multiple sclerosis I Lindeman, J Polak, SW Qiao, T Holmøy, RA Høglund, F Vartdal, ... European Journal of Immunology, 2022 | 11 | 2022 |
| Antigen Receptor Sequence Reconstruction and Clonality Inference from scRNA-Seq Data I Lindeman, MJT Stubbington Yuan GC. (eds) Computational Methods for Single-Cell Data Analysis. Methods …, 2019 | 8 | 2019 |
| Exploiting antigen receptor information to quantify index switching in single-cell transcriptome sequencing experiments Y Yao, A Zia, Ł Wyrożemski, I Lindeman, GK Sandve, SW Qiao Plos one 13 (12), e0208484, 2018 | 6 | 2018 |
| Single-Cell Analysis and Tracking of Antigen-Specific T Cells: Integrating Paired ChainPaired chain AIRR-Seq and Transcriptome Sequencing: A Method by the … N Gupta, I Lindeman, S Reinhardt, E Mariotti-Ferrandiz, K Mujangi-Ebeka, ... Immunogenetics: Methods and Protocols, 379-421, 2022 | 3 | 2022 |
| Single-cell approaches to dissect adaptive immune responses involved in autoimmunity: the case of celiac disease I Lindeman, LM Sollid Mucosal immunology 15 (1), 51-63, 2021 | 3 | 2021 |
| Polymorphisms in immunoglobulin heavy chain variable genes and their upstream regions I Mikocziova, M Gidoni, I Lindeman, A Peres, O Snir, G Yaari, LM Sollid bioRxiv, 2020.01. 27.921197, 2020 | 1 | 2020 |
| Generation of circulating autoreactive pre-plasma cells fueled by naïve B cells in celiac disease I Lindeman, LS Høydahl, A Christophersen, LF Risnes, J Jahnsen, ... Cell Reports 43 (4), 2024 | | 2024 |
| Single-cell transcriptomics combined with proteomics of intrathecal IgG reveal transcriptional heterogeneity of oligoclonal IgG-secreting cells in multiple sclerosis J Polak, JH Wagnerberger, SB Torsetnes, I Lindeman, RAA Høglund, ... Frontiers in Cellular Neuroscience 17, 1189709, 2023 | | 2023 |
| Intrathecal antibody-secreting cells in multiple sclerosis display distinct phenotypes with low expression of MS4A1 (CD20) J Wagnerberger, J Polak, I Lindeman, SB Torsetnes, T Holmoy, F Vartdal, ... MULTIPLE SCLEROSIS JOURNAL 28 (3_ SUPPL), 987-987, 2022 | | 2022 |
| Transcriptional profiling and clonal inference of B-lineage cells in autoimmune diseases - One cell at a time I Lindeman University of Oslo, 2020 | | 2020 |
| Antibody repertoire sequencing and genomic DNA analysis reveal a large number of polymorphisms in the variable immunoglobulin genes I Mikocziova, M Gidoni, I Lindeman, O Snir, G Yaari, LM Sollid SCANDINAVIAN JOURNAL OF IMMUNOLOGY 90 (6), 2019 | | 2019 |
| Single-cell analysis of intrathecal B cells in multiple sclerosis J Polak, I Lindeman, T Holmoy, LM Sollid, A Lossius MULTIPLE SCLEROSIS JOURNAL 24, 1010-1011, 2018 | | 2018 |
| Analysis of Ikaros tumor suppressor function in BCR-ABL1+ pre-B ALL reveals conserved target genes and biological pathways H Schjerven, EF Ayongaba, J McLaughlin, D Cheng, LM Eggesbø, ... The Journal of Immunology 196 (1_Supplement), 122.6-122.6, 2016 | | 2016 |
| Ikaros tumor suppressor function in pre-B ALL: potential role of Ikaros target gene Ctnnd1 (IRM10P. 621) H Schjerven, L Eggesbo, I Lindeman, M Muschen The Journal of Immunology 194 (1_Supplement), 131.19-131.19, 2015 | | 2015 |
