| Chaste: an open source C++ library for computational physiology and biology GR Mirams, CJ Arthurs, MO Bernabeu, R Bordas, J Cooper, A Corrias, ... PLoS Comput Biol 9 (3), e1002970, 2013 | 349 | 2013 |
| Chaste: a test-driven approach to software development for biological modelling J Pitt-Francis, P Pathmanathan, MO Bernabeu, R Bordas, J Cooper, ... Computer Physics Communications 180 (12), 2452-2471, 2009 | 259 | 2009 |
| An integrative computational model for intestinal tissue renewal IMM Van Leeuwen, GR Mirams, A Walter, A Fletcher, P Murray, J Osborne, ... Cell proliferation 42 (5), 617-636, 2009 | 163 | 2009 |
| A hybrid approach to multi-scale modelling of cancer JM Osborne, A Walter, SK Kershaw, GR Mirams, AG Fletcher, ... Philosophical Transactions of the Royal Society A: Mathematical, Physical …, 2010 | 128 | 2010 |
| A computational study of discrete mechanical tissue models P Pathmanathan, J Cooper, A Fletcher, G Mirams, P Murray, J Osborne, ... Physical biology 6 (3), 036001, 2009 | 107 | 2009 |
| Comparing individual-based approaches to modelling the self-organization of multicellular tissues JM Osborne, AG Fletcher, JM Pitt-Francis, PK Maini, DJ Gavaghan PLoS computational biology 13 (2), e1005387, 2017 | 100 | 2017 |
| Implementing vertex dynamics models of cell populations in biology within a consistent computational framework AG Fletcher, JM Osborne, PK Maini, DJ Gavaghan Progress in biophysics and molecular biology 113 (2), 299-326, 2013 | 91 | 2013 |
| Chaste: using agile programming techniques to develop computational biology software J Pitt-Francis, MO Bernabeu, J Cooper, A Garny, L Momtahan, J Osborne, ... Philosophical Transactions of the Royal Society A: Mathematical, Physical …, 2008 | 91 | 2008 |
| Cell morphology drives spatial patterning in microbial communities WPJ Smith, Y Davit, JM Osborne, W Kim, KR Foster, JM Pitt-Francis Proceedings of the National Academy of Sciences 114 (3), E280-E286, 2017 | 84 | 2017 |
| Cooperation, competition and antibiotic resistance in bacterial colonies I Frost, WPJ Smith, S Mitri, A San Millan, Y Davit, JM Osborne, ... The ISME journal 12 (6), 1582-1593, 2018 | 62 | 2018 |
| Paneth cell-rich regions separated by a cluster of Lgr5+ cells initiate crypt fission in the intestinal stem cell niche AJ Langlands, AA Almet, PL Appleton, IP Newton, JM Osborne, IS Näthke PLoS biology 14 (6), e1002491, 2016 | 50 | 2016 |
| Computational models reveal a passive mechanism for cell migration in the crypt SJ Dunn, IS Näthke, JM Osborne PloS one 8 (11), e80516, 2013 | 48 | 2013 |
| Hydrodynamic dispersion within porous biofilms Y Davit, H Byrne, J Osborne, J Pitt-Francis, D Gavaghan, M Quintard Physical Review E 87 (1), 012718, 2013 | 41 | 2013 |
| A two-dimensional model of the colonic crypt accounting for the role of the basement membrane and pericryptal fibroblast sheath SJ Dunn, PL Appleton, SA Nelson, IS Näthke, DJ Gavaghan, JM Osborne PLoS Comput Biol 8 (5), e1002515, 2012 | 41 | 2012 |
| Ten simple rules for a successful cross-disciplinary collaboration B Knapp, R Bardenet, MO Bernabeu, R Bordas, M Bruna, B Calderhead, ... PLoS Comput Biol 11 (4), e1004214, 2015 | 40 | 2015 |
| Ten simple rules for effective computational research JM Osborne, MO Bernabeu, M Bruna, B Calderhead, J Cooper, ... PLoS Comput Biol 10 (3), e1003506, 2014 | 38 | 2014 |
| Reversible host cell remodeling underpins deformability changes in malaria parasite sexual blood stages M Dearnley, T Chu, Y Zhang, O Looker, C Huang, N Klonis, J Yeoman, ... Proceedings of the National Academy of Sciences 113 (17), 4800-4805, 2016 | 36 | 2016 |
| The influence of bioreactor geometry and the mechanical environment on engineered tissues JM Osborne, RD O’Dea, JP Whiteley, HM Byrne, SL Waters Journal of biomechanical engineering 132 (5), 2010 | 34 | 2010 |
| Modelling the role of the basement membrane beneath a growing epithelial monolayer SJ Dunn, AG Fletcher, SJ Chapman, DJ Gavaghan, JM Osborne Journal of theoretical biology 298, 82-91, 2012 | 33 | 2012 |
| Colorectal cancer through simulation and experiment SK Kershaw, HM Byrne, DJ Gavaghan, JM Osborne IET systems biology 7 (3), 57-73, 2013 | 32 | 2013 |
David GavaghanProfessor of Computational Biology, University of OxfordVerified email at cs.ox.ac.uk
