James Osborne
James Osborne
Verified email at unimelb.edu.au - Homepage
Title
Cited by
Cited by
Year
Chaste: an open source C++ library for computational physiology and biology
GR Mirams, CJ Arthurs, MO Bernabeu, R Bordas, J Cooper, A Corrias, ...
PLoS Comput Biol 9 (3), e1002970, 2013
3492013
Chaste: a test-driven approach to software development for biological modelling
J Pitt-Francis, P Pathmanathan, MO Bernabeu, R Bordas, J Cooper, ...
Computer Physics Communications 180 (12), 2452-2471, 2009
2592009
An integrative computational model for intestinal tissue renewal
IMM Van Leeuwen, GR Mirams, A Walter, A Fletcher, P Murray, J Osborne, ...
Cell proliferation 42 (5), 617-636, 2009
1632009
A hybrid approach to multi-scale modelling of cancer
JM Osborne, A Walter, SK Kershaw, GR Mirams, AG Fletcher, ...
Philosophical Transactions of the Royal Society A: Mathematical, Physical …, 2010
1282010
A computational study of discrete mechanical tissue models
P Pathmanathan, J Cooper, A Fletcher, G Mirams, P Murray, J Osborne, ...
Physical biology 6 (3), 036001, 2009
1072009
Comparing individual-based approaches to modelling the self-organization of multicellular tissues
JM Osborne, AG Fletcher, JM Pitt-Francis, PK Maini, DJ Gavaghan
PLoS computational biology 13 (2), e1005387, 2017
1002017
Implementing vertex dynamics models of cell populations in biology within a consistent computational framework
AG Fletcher, JM Osborne, PK Maini, DJ Gavaghan
Progress in biophysics and molecular biology 113 (2), 299-326, 2013
912013
Chaste: using agile programming techniques to develop computational biology software
J Pitt-Francis, MO Bernabeu, J Cooper, A Garny, L Momtahan, J Osborne, ...
Philosophical Transactions of the Royal Society A: Mathematical, Physical …, 2008
912008
Cell morphology drives spatial patterning in microbial communities
WPJ Smith, Y Davit, JM Osborne, W Kim, KR Foster, JM Pitt-Francis
Proceedings of the National Academy of Sciences 114 (3), E280-E286, 2017
842017
Cooperation, competition and antibiotic resistance in bacterial colonies
I Frost, WPJ Smith, S Mitri, A San Millan, Y Davit, JM Osborne, ...
The ISME journal 12 (6), 1582-1593, 2018
622018
Paneth cell-rich regions separated by a cluster of Lgr5+ cells initiate crypt fission in the intestinal stem cell niche
AJ Langlands, AA Almet, PL Appleton, IP Newton, JM Osborne, IS Näthke
PLoS biology 14 (6), e1002491, 2016
502016
Computational models reveal a passive mechanism for cell migration in the crypt
SJ Dunn, IS Näthke, JM Osborne
PloS one 8 (11), e80516, 2013
482013
Hydrodynamic dispersion within porous biofilms
Y Davit, H Byrne, J Osborne, J Pitt-Francis, D Gavaghan, M Quintard
Physical Review E 87 (1), 012718, 2013
412013
A two-dimensional model of the colonic crypt accounting for the role of the basement membrane and pericryptal fibroblast sheath
SJ Dunn, PL Appleton, SA Nelson, IS Näthke, DJ Gavaghan, JM Osborne
PLoS Comput Biol 8 (5), e1002515, 2012
412012
Ten simple rules for a successful cross-disciplinary collaboration
B Knapp, R Bardenet, MO Bernabeu, R Bordas, M Bruna, B Calderhead, ...
PLoS Comput Biol 11 (4), e1004214, 2015
402015
Ten simple rules for effective computational research
JM Osborne, MO Bernabeu, M Bruna, B Calderhead, J Cooper, ...
PLoS Comput Biol 10 (3), e1003506, 2014
382014
Reversible host cell remodeling underpins deformability changes in malaria parasite sexual blood stages
M Dearnley, T Chu, Y Zhang, O Looker, C Huang, N Klonis, J Yeoman, ...
Proceedings of the National Academy of Sciences 113 (17), 4800-4805, 2016
362016
The influence of bioreactor geometry and the mechanical environment on engineered tissues
JM Osborne, RD O’Dea, JP Whiteley, HM Byrne, SL Waters
Journal of biomechanical engineering 132 (5), 2010
342010
Modelling the role of the basement membrane beneath a growing epithelial monolayer
SJ Dunn, AG Fletcher, SJ Chapman, DJ Gavaghan, JM Osborne
Journal of theoretical biology 298, 82-91, 2012
332012
Colorectal cancer through simulation and experiment
SK Kershaw, HM Byrne, DJ Gavaghan, JM Osborne
IET systems biology 7 (3), 57-73, 2013
322013
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