Ekaterina Semenova
Ekaterina Semenova
Assistant Research Professor, Waksman Institute, Rutgers University NJ
Verified email at waksman.rutgers.edu
Title
Cited by
Cited by
Year
C2c2 is a single-component programmable RNA-guided RNA-targeting CRISPR effector
OO Abudayyeh, JS Gootenberg, S Konermann, J Joung, IM Slaymaker, ...
Science 353 (6299), 2016
11062016
Interference by clustered regularly interspaced short palindromic repeat (CRISPR) RNA is governed by a seed sequence
E Semenova, MM Jore, KA Datsenko, A Semenova, ER Westra, B Wanner, ...
Proceedings of the National Academy of Sciences 108 (25), 10098-10103, 2011
8132011
Discovery and functional characterization of diverse class 2 CRISPR-Cas systems
S Shmakov, OO Abudayyeh, KS Makarova, YI Wolf, JS Gootenberg, ...
Molecular cell 60 (3), 385-397, 2015
8012015
CRISPR immunity relies on the consecutive binding and degradation of negatively supercoiled invader DNA by Cascade and Cas3
ER Westra, PBG van Erp, T Künne, SP Wong, RHJ Staals, CLC Seegers, ...
Molecular cell 46 (5), 595-605, 2012
5822012
Molecular memory of prior infections activates the CRISPR/Cas adaptive bacterial immunity system
KA Datsenko, K Pougach, A Tikhonov, BL Wanner, K Severinov, ...
Nature communications 3 (1), 1-7, 2012
5412012
Transcription, processing and function of CRISPR cassettes in Escherichia coli
K Pougach, E Semenova, E Bogdanova, KA Datsenko, M Djordjevic, ...
Molecular microbiology 77 (6), 1367-1379, 2010
2672010
Type IE CRISPR-cas systems discriminate target from non-target DNA through base pairing-independent PAM recognition
ER Westra, E Semenova, KA Datsenko, RN Jackson, B Wiedenheft, ...
PLoS genetics 9 (9), e1003742, 2013
2162013
Genome-Wide Identification of Regulatory RNAs in the Human Pathogen Clostridium difficile
OA Soutourina, M Monot, P Boudry, L Saujet, C Pichon, O Sismeiro, ...
PLoS genetics 9 (5), e1003493, 2013
2112013
Low‐molecular‐weight post‐translationally modified microcins
K Severinov, E Semenova, A Kazakov, T Kazakov, MS Gelfand
Molecular microbiology 65 (6), 1380-1394, 2007
1412007
High-throughput analysis of type IE CRISPR/Cas spacer acquisition in E. coli
E Savitskaya, E Semenova, V Dedkov, A Metlitskaya, K Severinov
RNA biology 10 (5), 716-725, 2013
1132013
Analysis of CRISPR system function in plant pathogen Xanthomonas oryzae
E Semenova, M Nagornykh, M Pyatnitskiy, II Artamonova, K Severinov
FEMS microbiology letters 296 (1), 110-116, 2009
872009
Analysis of Promoter Targets for Escherichia coli Transcription Elongation Factor GreA In Vivo and In Vitro
E Stepanova, J Lee, M Ozerova, E Semenova, K Datsenko, BL Wanner, ...
Journal of bacteriology 189 (24), 8772-8785, 2007
852007
Highly efficient primed spacer acquisition from targets destroyed by the Escherichia coli type IE CRISPR-Cas interfering complex
E Semenova, E Savitskaya, O Musharova, A Strotskaya, D Vorontsova, ...
Proceedings of the National Academy of Sciences 113 (27), 7626-7631, 2016
812016
Pervasive generation of oppositely oriented spacers during CRISPR adaptation
S Shmakov, E Savitskaya, E Semenova, MD Logacheva, KA Datsenko, ...
Nucleic acids research 42 (9), 5907-5916, 2014
782014
Foreign DNA acquisition by the IF CRISPR–Cas system requires all components of the interference machinery
D Vorontsova, KA Datsenko, S Medvedeva, J Bondy-Denomy, ...
Nucleic acids research 43 (22), 10848-10860, 2015
772015
The antibacterial threaded-lasso peptide capistruin inhibits bacterial RNA polymerase
K Kuznedelov, E Semenova, TA Knappe, D Mukhamedyarov, ...
Journal of molecular biology 412 (5), 842-848, 2011
752011
Kinetics of the CRISPR-Cas9 effector complex assembly and the role of 3′-terminal segment of guide RNA
V Mekler, L Minakhin, E Semenova, K Kuznedelov, K Severinov
Nucleic acids research 44 (6), 2837-2845, 2016
732016
Control of bacterial motility by environmental factors in polarly flagellated and peritrichous bacteria isolated from Lake Baikal
OA Soutourina, EA Semenova, VV Parfenova, A Danchin, P Bertin
Applied and Environmental Microbiology 67 (9), 3852-3859, 2001
632001
Synthetic microcin C analogs targeting different aminoacyl-tRNA synthetases
P Van de Vijver, GHM Vondenhoff, TS Kazakov, E Semenova, ...
Journal of bacteriology 191 (20), 6273-6280, 2009
572009
Structure-activity analysis of microcin J25: distinct parts of the threaded lasso molecule are responsible for interaction with bacterial RNA polymerase
E Semenova, Y Yuzenkova, J Peduzzi, S Rebuffat, K Severinov
Journal of bacteriology 187 (11), 3859-3863, 2005
552005
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