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Irene Farabella
Irene Farabella
Principal Investigator @Fondazione Istituto Italiano di Tecnologia (IIT)
Verified email at iit.it - Homepage
Title
Cited by
Cited by
Year
Walking along chromosomes with super-resolution imaging, contact maps, and integrative modeling
G Nir, I Farabella, C Pérez Estrada, CG Ebeling, BJ Beliveau, HM Sasaki, ...
PLoS genetics 14 (12), e1007872, 2018
2382018
Human pancreatic islet three-dimensional chromatin architecture provides insights into the genetics of type 2 diabetes
I Miguel-Escalada, S Bonŕs-Guarch, I Cebola, J Ponsa-Cobas, ...
Nature genetics 51 (7), 1137-1148, 2019
2322019
Stepwise visualization of membrane pore formation by suilysin, a bacterial cholesterol-dependent cytolysin
C Leung, NV Dudkina, N Lukoyanova, AW Hodel, I Farabella, ...
elife 3, e04247, 2014
1662014
Mutations in SLC12A5 in epilepsy of infancy with migrating focal seizures
T Stödberg, A McTague, AJ Ruiz, H Hirata, J Zhen, P Long, I Farabella, ...
Nature communications 6 (1), 8038, 2015
1602015
Conformational changes during pore formation by the perforin-related protein pleurotolysin
N Lukoyanova, SC Kondos, I Farabella, RHP Law, CF Reboul, ...
PLoS biology 13 (2), e1002049, 2015
1402015
Conserved mechanisms of microtubule-stimulated ADP release, ATP binding, and force generation in transport kinesins
J Atherton, I Farabella, IM Yu, SS Rosenfeld, A Houdusse, M Topf, ...
Elife 3, e03680, 2014
1202014
Dynamics of genome architecture and chromatin function during human B cell differentiation and neoplastic transformation
R Vilarrasa-Blasi, P Soler-Vila, N Verdaguer-Dot, N Russińol, ...
Nature communications 12 (1), 651, 2021
842021
TEMPy: a Python library for assessment of three-dimensional electron microscopy density fits
I Farabella, D Vasishtan, AP Joseph, AP Pandurangan, H Sahota, M Topf
Journal of applied crystallography 48 (4), 1314-1323, 2015
812015
Zinc binding to the Tyr402 and His402 allotypes of complement factor H: possible implications for age-related macular degeneration
R Nan, I Farabella, FF Schumacher, A Miller, J Gor, ACR Martin, DT Jones, ...
Journal of molecular biology 408 (4), 714-735, 2011
492011
Transcriptional activation during cell reprogramming correlates with the formation of 3D open chromatin hubs
M Di Stefano, R Stadhouders, I Farabella, D Castillo, F Serra, T Graf, ...
Nature communications 11 (1), 2564, 2020
452020
Chromatin alternates between A and B compartments at kilobase scale for subgenic organization
HL Harris, H Gu, M Olshansky, A Wang, I Farabella, Y Eliaz, A Kalluchi, ...
Nature communications 14 (1), 3303, 2023
352023
Hierarchical chromatin organization detected by TADpole
P Soler-Vila, P Cusco, I Farabella, M Di Stefano, MA Marti-Renom
Nucleic acids research 48 (7), e39-e39, 2020
302020
RNA proximity sequencing reveals the spatial organization of the transcriptome in the nucleus
J Morf, SW Wingett, I Farabella, J Cairns, M Furlan-Magaril, ...
Nature biotechnology 37 (7), 793-802, 2019
292019
Three-dimensional genome organization via triplex-forming RNAs
I Farabella, M Di Stefano, P Soler-Vila, M Marti-Marimon, ...
Nature Structural & Molecular Biology 28 (11), 945-954, 2021
212021
Allosteric signalling in the outer membrane translocation domain of PapC usher
I Farabella, T Pham, NS Henderson, S Geibel, G Phan, DG Thanassi, ...
Elife 3, e03532, 2014
182014
3D reconstruction of genomic regions from sparse interaction data
J Mendieta-Esteban, M Di Stefano, D Castillo, I Farabella, ...
NAR Genomics and Bioinformatics 3 (1), lqab017, 2021
32021
Analysis, modeling, and visualization of chromosome conformation capture experiments
M Di Stefano, D Castillo, F Serra, I Farabella, MN Goodstadt, ...
Capturing Chromosome Conformation: Methods and Protocols, 35-63, 2021
32021
TADs without borders
I Farabella, MA Marti-Renom
Nature Genetics 52 (8), 752-753, 2020
32020
Dynamic simulations of transcriptional control during cell reprogramming reveal spatial chromatin caging
M Di Stefano, R Stadhouders, I Farabella, D Castillo, F Serra, T Graf, ...
bioRxiv, 642009, 2019
32019
Genome-wide tracing to decipher nuclear organization
V Flores, I Farabella, G Nir
Current Opinion in Cell Biology 82, 102175, 2023
22023
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