Salim Bougouffa
Salim Bougouffa
CBRC, KAUST
Verified email at kaust.edu.sa - Homepage
TitleCited byYear
Genomes of coral dinoflagellate symbionts highlight evolutionary adaptations conducive to a symbiotic lifestyle
M Aranda, Y Li, YJ Liew, S Baumgarten, O Simakov, MC Wilson, J Piel, ...
Scientific Reports 6, 39734, 2016
1202016
Spatial and species variations in bacterial communities associated with corals from the Red Sea as revealed by pyrosequencing
OO Lee, J Yang, S Bougouffa, Y Wang, Z Batang, R Tian, A Al-Suwailem, ...
Appl. Environ. Microbiol. 78 (20), 7173-7184, 2012
722012
Optimal eukaryotic 18S and universal 16S/18S ribosomal RNA primers and their application in a study of symbiosis
Y Wang, RM Tian, ZM Gao, S Bougouffa, PY Qian
PloS one 9 (3), e90053, 2014
592014
Distinctive microbial community structure in highly stratified deep-sea brine water columns
S Bougouffa, JK Yang, OO Lee, Y Wang, Z Batang, A Al-Suwailem, ...
Appl. Environ. Microbiol. 79 (11), 3425-3437, 2013
512013
Rhizosphere microbiome metagenomics of gray mangroves (Avicennia marina) in the Red Sea
H Alzubaidy, M Essack, TB Malas, A Bokhari, O Motwalli, FK Kamanu, ...
Gene 576 (2), 626-636, 2016
482016
Genomic analysis reveals versatile heterotrophic capacity of a potentially symbiotic sulfur‐oxidizing bacterium in sponge
RM Tian, Y Wang, S Bougouffa, ZM Gao, L Cai, V Bajic, PY Qian
Environmental microbiology 16 (11), 3548-3561, 2014
422014
Autotrophic microbe metagenomes and metabolic pathways differentiate adjacent Red Sea brine pools
Y Wang, H Cao, G Zhang, S Bougouffa, OO Lee, A Al-Suwailem, PY Qian
Scientific reports 3, 1748, 2013
302013
Pyrosequencing reveals the microbial communities in the Red Sea sponge Carteriospongia foliascens and their impressive shifts in abnormal tissues
ZM Gao, Y Wang, OO Lee, RM Tian, YH Wong, S Bougouffa, Z Batang, ...
Microbial ecology 68 (3), 621-632, 2014
292014
In situ environment rather than substrate type dictates microbial community structure of biofilms in a cold seep system
OO Lee, Y Wang, R Tian, W Zhang, CS Shek, S Bougouffa, ...
Scientific reports 4, 3587, 2014
222014
SitesIdentify: a protein functional site prediction tool
T Bray, P Chan, S Bougouffa, R Greaves, AJ Doig, J Warwicker
BMC bioinformatics 10 (1), 379, 2009
222009
Species sorting during biofilm assembly by artificial substrates deployed in a cold seep system
WP Zhang, Y Wang, RM Tian, S Bougouffa, B Yang, HL Cao, G Zhang, ...
Scientific reports 4, 6647, 2014
192014
bTSSfinder: a novel tool for the prediction of promoters in cyanobacteria and Escherichia coli
IA Shahmuradov, R Mohamad Razali, S Bougouffa, A Radovanovic, ...
Bioinformatics 33 (3), 334-340, 2017
172017
Synchronized dynamics of bacterial niche‐specific functions during biofilm development in a cold seep brine pool
W Zhang, Y Wang, S Bougouffa, R Tian, H Cao, Y Li, L Cai, YH Wong, ...
Environmental microbiology 17 (10), 4089-4104, 2015
172015
DEOP: a database on osmoprotectants and associated pathways
S Bougouffa, A Radovanovic, M Essack, VB Bajic
Database 2014, 2014
172014
Effect of copper treatment on the composition and function of the bacterial community in the sponge Haliclona cymaeformis
RM Tian, Y Wang, S Bougouffa, ZM Gao, L Cai, WP Zhang, V Bajic, ...
MBio 5 (6), e01980-14, 2014
162014
Toward understanding the dynamics of microbial communities in an estuarine system
W Zhang, S Bougouffa, Y Wang, OO Lee, J Yang, C Chan, X Song, ...
PloS one 9 (4), e94449, 2014
162014
Volume-based solvation models out-perform area-based models in combined studies of wild-type and mutated protein-protein interfaces
S Bougouffa, J Warwicker
BMC bioinformatics 9 (1), 448, 2008
122008
Bioprospecting Red Sea coastal ecosystems for culturable microorganisms and their antimicrobial potential
S Al-Amoudi, M Essack, M Simões, S Bougouffa, I Soloviev, J Archer, ...
Marine drugs 14 (9), 165, 2016
112016
Transcriptome analysis elucidates key developmental components of bryozoan lophophore development
YH Wong, T Ryu, L Seridi, Y Ghosheh, S Bougouffa, PY Qian, T Ravasi
Scientific reports 4, 6534, 2014
112014
Comparative genome and transcriptome analysis reveals distinctive surface characteristics and unique physiological potentials of Pseudomonas aeruginosa ATCC 27853
H Cao, Y Lai, S Bougouffa, Z Xu, A Yan
BMC genomics 18 (1), 459, 2017
82017
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Articles 1–20