| Single-pot, solid-phase-enhanced sample preparation for proteomics experiments CS Hughes, S Moggridge, T Müller, PH Sorensen, GB Morin, J Krijgsveld Nature protocols 14 (1), 68-85, 2019 | 983 | 2019 |
| Multi-omic measurements of heterogeneity in HeLa cells across laboratories Y Liu, Y Mi, T Mueller, S Kreibich, EG Williams, A Van Drogen, C Borel, ... Nature biotechnology 37 (3), 314-322, 2019 | 304 | 2019 |
| Automated sample preparation with SP3 for low‐input clinical proteomics T Müller, M Kalxdorf, R Longuespée, DN Kazdal, A Stenzinger, ... Molecular Systems Biology 16 (1), 2020 | 165 | 2020 |
| Systematic evaluation of protein reduction and alkylation reveals massive unspecific side effects by iodine-containing reagents T Müller, D Winter Molecular & Cellular Proteomics 16 (7), 1173-1187, 2017 | 160 | 2017 |
| EZHIP/CXorf67 mimics K27M mutated oncohistones and functions as an intrinsic inhibitor of PRC2 function in aggressive posterior fossa ependymoma JM Hübner, T Müller, DN Papageorgiou, M Mauermann, J Krijgsveld, ... Neuro-oncology 21 (7), 878-889, 2019 | 123 | 2019 |
| Systematic proteome and proteostasis profiling in human Trisomy 21 fibroblast cells Y Liu, C Borel, L Li, T Müller, EG Williams, PL Germain, M Buljan, T Sajic, ... Nature communications 8 (1), 1-15, 2017 | 120 | 2017 |
| Global and Site-Specific Effect of Phosphorylation on Protein Turnover C Wu, Q Ba, D Lu, W Li, B Salovska, P Hou, T Mueller, G Rosenberger, ... Developmental Cell 56 (1), 111-124. e6, 2021 | 65 | 2021 |
| IceR improves proteome coverage and data completeness in global and single-cell proteomics M Kalxdorf, T Müller, O Stegle, J Krijgsveld Nature Communications 12 (1), 1-15, 2021 | 38 | 2021 |
| Spatial distribution of endogenous tissue protease activity in gastric carcinoma mapped by MALDI mass spectrometry imaging K Erich, K Reinle, T Müller, B Munteanu, DA Sammour, I Hinsenkamp, ... Molecular & Cellular Proteomics 18 (1), 151-161, 2019 | 33 | 2019 |
| Updated and enhanced pig cardiac transcriptome based on long-read RNA sequencing and proteomics T Müller, E Boileau, S Talyan, D Kehr, K Varadi, M Busch, P Most, ... Journal of molecular and cellular cardiology 150, 23-31, 2021 | 19 | 2021 |
| Pre-analytical processing of plasma and serum samples for combined proteome and metabolome analysis HM Gegner, T Naake, A Dugourd, T Mueller, F Czernilofsky, G Kliewer, ... bioRxiv, 2022 | 11 | 2022 |
| Functional States in Tumor-Initiating Cell Differentiation in Human Colorectal Cancer MK Zowada, SM Tirier, SM Dieter, TG Krieger, A Oberlack, RL Chua, ... Cancers 13 (5), 1097, 2021 | 10 | 2021 |
| Genomic, proteomic and phenotypic heterogeneity in HeLa cells across laboratories: implications for reproducibility of research results Y Liu, Y Mi, T Mueller, S Kreibich, EG Williams, A Van Drogen, C Borel, ... bioRxiv, 307421, 2018 | 10 | 2018 |
| An integrated workflow for quantitative analysis of the newly synthesized proteome T Bortecen, T Mueller, J Krijgsveld bioRxiv, 2023.03. 03.530942, 2023 | 7 | 2023 |
| Spatial tissue proteomics reveals distinct landscapes of heterogeneity in cutaneous papillomavirus‐induced keratinocyte carcinomas M Schäfer, M Schneider, T Müller, N Franz, I Braspenning‐Wesch, ... Journal of Medical Virology 95 (6), e28850, 2023 | 2 | 2023 |
| Global impact of phosphorylation on protein endurance C Wu, Q Ba, W Li, B Salovska, P Hou, T Mueller, G Rosenberger, E Gao, ... bioRxiv, 2020 | 2 | 2020 |
| Automated Sample Preparation for Mass Spectrometry-Based Clinical Proteomics T Müller, MA Cremonini, G Kliewer, J Krijgsveld Mass Spectrometry-Based Proteomics, 181-211, 2023 | 1 | 2023 |
| A single-sample workflow for joint metabolomic and proteomic analysis of clinical specimens JK Hagen Gegner, Thomas Naake, Karim Aljakouch, Aurelien Dugourd, Georg ... Biorxiv, 2023 | | 2023 |
| Transcriptional heterogeneity identifies functional states of tumor-initiating cell differentiation in human colorectal cancer MK Zowada, SM Tirier, SM Dieter, T Krieger, A Oberlack, RL Chua, ... Cancer Research 80 (16 Supplement), 1491-1491, 2020 | | 2020 |
| Automated sample preparation for streamlined proteomic profiling of clinical specimens TM Müller | | 2020 |
