Morana Vitezic
Morana Vitezic
Principal bioinformatician, Bioinformatics, H. Lundbeck A/S
Verified email at lundbeck.com
TitleCited byYear
A promoter-level mammalian expression atlas
ARR Forrest, H Kawaji, M Rehli, JK Baillie, MJL De Hoon, V Haberle, ...
Nature 507 (7493), 462, 2014
6972014
Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells
E Arner, CO Daub, K Vitting-Seerup, R Andersson, B Lilje, F Drabløs, ...
Science 347 (6225), 1010-1014, 2015
3402015
Linking promoters to functional transcripts in small samples with nanoCAGE and CAGEscan
C Plessy, N Bertin, H Takahashi, R Simone, M Salimullah, T Lassmann, ...
Nature methods 7 (7), 528, 2010
1282010
Molecular networks of DYX1C1 gene show connection to neuronal migration genes and cytoskeletal proteins
K Tammimies, M Vitezic, H Matsson, S Le Guyader, TR Bürglin, T Öhman, ...
Biological psychiatry 73 (6), 583-590, 2013
412013
Age-associated DNA methylation changes in immune genes, histone modifiers and chromatin remodeling factors within 5 years after birth in human blood leukocytes
N Acevedo, LE Reinius, M Vitezic, V Fortino, C Söderhäll, H Honkanen, ...
Clinical epigenetics 7 (1), 34, 2015
352015
Regional differences in gene expression and promoter usage in aged human brains
LM Pardo, P Rizzu, M Francescatto, M Vitezic, GGR Leday, JS Sanchez, ...
Neurobiology of aging 34 (7), 1825-1836, 2013
262013
RECLU: a pipeline to discover reproducible transcriptional start sites and their alternative regulation using capped analysis of gene expression (CAGE)
H Ohmiya, M Vitezic, MC Frith, M Itoh, P Carninci, ARR Forrest, ...
BMC genomics 15 (1), 269, 2014
222014
Characterization of the enhancer and promoter landscape of inflammatory bowel disease from human colon biopsies
M Boyd, M Thodberg, M Vitezic, J Bornholdt, K Vitting-Seerup, Y Chen, ...
Nature communications 9 (1), 1661, 2018
162018
Brain-specific noncoding RNAs are likely to originate in repeats and may play a role in up-regulating genes in cis
M Francescatto, M Vitezic, P Heutink, A Saxena
The international journal of biochemistry & cell biology 54, 331-337, 2014
162014
Building promoter aware transcriptional regulatory networks using siRNA perturbation and deepCAGE
M Vitezic, T Lassmann, ARR Forrest, M Suzuki, Y Tomaru, J Kawai, ...
Nucleic acids research 38 (22), 8141-8148, 2010
132010
Identification of TNF-α-responsive promoters and enhancers in the intestinal epithelial cell model Caco-2
M Boyd, M Coskun, B Lilje, R Andersson, I Hoof, J Bornholdt, K Dahlgaard, ...
DNA research 21 (6), 569-583, 2014
122014
Identification of Gene Transcription Start Sites and Enhancers Responding to Pulmonary Carbon Nanotube Exposure in Vivo
J Bornholdt, AT Saber, B Lilje, M Boyd, M Jørgensen, Y Chen, M Vitezic, ...
ACS nano 11 (4), 3597-3613, 2017
92017
Characterization of the human RFX transcription factor family by regulatory and target gene analysis
D Sugiaman-Trapman, M Vitezic, EM Jouhilahti, A Mathelier, G Lauter, ...
BMC genomics 19 (1), 181, 2018
62018
A comprehensive promoter landscape identifies a novel promoter for CD133 in restricted tissues, cancers, and stem cells
R Sompallae, OM Hofmann, CA Maher, C Gedye, A Behren, M Vitezic, ...
Frontiers in genetics 4, 209, 2013
62013
On-the-fly selection of cell-specific enhancers, genes, miRNAs and proteins across the human body using SlideBase
H Ienasescu, K Li, R Andersson, M Vitezic, S Rennie, Y Chen, ...
Database 2016, 2016
52016
CAGE-defined promoter regions of the genes implicated in Rett Syndrome
M Vitezic, N Bertin, R Andersson, L Lipovich, H Kawaji, T Lassmann, ...
BMC genomics 15 (1), 1177, 2014
52014
Profiling transcription initiation in human aged brain using deep-CAGE
M Francescatto, L Pardo, P Rizzu, M Vitezic, J Simón-Sánchez, ...
BMC bioinformatics 12 (11), A8, 2011
22011
Su1189 Genome-Wide Discovery of Inflammatory Bowel Disease-Specific Transcriptional Enhancers and Promoters Identifies Powerful Diagnostic Biomarkers
M Vitezic, M Boyd, J Bornholdt, M Coskun, M Thodberg, R Andersson, ...
Gastroenterology 148 (4), S-432, 2015
2015
Identification of promoters and enhancers induced by carbon nanotube exposure
J Bornholdt, B Lilje, AT Saber, M Boyd, M Jørgensen, Y Chen, M Vitezic, ...
First Annual Danish Bioinformatics Conference, 2015
2015
RECLU
H Ohmiya, M Vitezic, MC Frith, M Itoh, P Carninci, ARR Forrest, ...
BMC Genomics, 2014
2014
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