| Genetic consequences of the transatlantic slave trade in the Americas SJ Micheletti, K Bryc, SGA Esselmann, WA Freyman, ME Moreno, ... The American Journal of Human Genetics, 2020 | 130 | 2020 |
| Spatial phylogenetics of the native California flora AH Thornhill, BG Baldwin, WA Freyman, S Nosratinia, MM Kling, ... BMC Biology 15 (1), 96, 2017 | 128 | 2017 |
| The genetic architecture of depression in individuals of East Asian ancestry: a genome-wide association study O Giannakopoulou, K Lin, X Meng, MH Su, PH Kuo, RE Peterson, ... JAMA psychiatry 78 (11), 1258-1269, 2021 | 105 | 2021 |
| Spatial phylogenetics of the vascular flora of Chile RA Scherson, AH Thornhill, R Urbina-Casanova, WA Freyman, ... Molecular Phylogenetics and Evolution 112, 88-95, 2017 | 105 | 2017 |
| The Universal Floristic Quality Assessment (FQA) Calculator: an online tool for ecological assessment and monitoring WA Freyman, LA Masters, S Packard Methods in Ecology and Evolution 7 (3), 380–383, 2016 | 105 | 2016 |
| Retracing the Hawaiian silversword radiation despite phylogenetic, biogeographic, and paleogeographic uncertainty MJ Landis, WA Freyman, BG Baldwin Evolution 72 (11), 2343-2359, 2018 | 87 | 2018 |
| Cladogenetic and anagenetic models of chromosome number evolution: a Bayesian model averaging approach WA Freyman, S Höhna Systematic Biology 67 (2), 195-215, 2018 | 86 | 2018 |
| Species richness and endemism in the native flora of California BG Baldwin, AH Thornhill, WA Freyman, DD Ackerly, MM Kling, ... American Journal of Botany 104 (3), 487-501, 2017 | 72 | 2017 |
| Interaction among ploidy, breeding system and lineage diversification R ZenilFerguson, JG Burleigh, WA Freyman, B Igić, I Mayrose, ... New Phytologist 224 (3), 1252-1265, 2019 | 61 | 2019 |
| RevGadgets: An R package for visualizing Bayesian phylogenetic analyses from RevBayes CM Tribble, WA Freyman, MJ Landis, JY Lim, J Barido-Sottani, ... Methods in Ecology and Evolution 13 (2), 314-323, 2022 | 52 | 2022 |
| Stochastic character mapping of state-dependent diversification reveals the tempo of evolutionary decline in self-compatible lineages WA Freyman, S Höhna Systematic Biology 68 (3), 505-519, 2019 | 51 | 2019 |
| A Bayesian approach for estimating branch-specific speciation and extinction rates S Höhna, WA Freyman, Z Nolen, JP Huelsenbeck, MR May, BR Moore bioRxiv, 2019 | 44* | 2019 |
| SUMAC: constructing phylogenetic supermatrices and assessing partially decisive taxon coverage WA Freyman Evolutionary Bioinformatics 11, 263-266, 2015 | 31 | 2015 |
| Fast and robust identity-by-descent inference with the templated positional Burrows-Wheeler transform WA Freyman, KF McManus, SS Shringarpure, EM Jewett, K Bryc, A Auton Molecular Biology and Evolution, 2020 | 26 | 2020 |
| homologizer: Phylogenetic phasing of gene copies into polyploid subgenomes WA Freyman, MG Johnson, CJ Rothfels Methods in Ecology and Evolution 14 (5), 1230–1244, 2023 | 19 | 2023 |
| Pleistocene radiation of the serpentine-adapted genus Hesperolinon and other divergence times in Linaceae (Malpighiales) AC Schneider, WA Freyman, CM Guilliams, YP Springer, BG Baldwin American Journal of Botany 103 (2), 221-232, 2016 | 19 | 2016 |
| Prevalence of alpha-1 antitrypsin deficiency, self-reported behavior change, and health care engagement among direct-to-consumer recipients of a personalized genetic risk report JR Ashenhurst, H Nhan, JF Shelton, S Wu, JY Tung, SL Elson, JK Stoller, ... Chest 161 (2), 373-381, 2022 | 15 | 2022 |
| Phase-aware determination of identity-by-descent dna segments WA Freyman, KF McManus, SS Shringarpure, EM Jewett, A Auton US Patent App. 16/947,107, 2021 | 15 | 2021 |
| Phylogenomics of Perityleae (Compositae) provides new insights into morphological and chromosomal evolution of the rock daisies BGB LichterMarck, I.H., Freyman, W.A., Siniscalchi, C.M., Mandel, J.R ... Journal of Systematics and Evolution 58 (6), 853-880, 2020 | 15 | 2020 |
| Multi-trait genetic analysis identifies autoimmune loci associated with cutaneous melanoma UE Liyanage, S MacGregor, DT Bishop, J Shi, J An, JS Ong, X Han, ... Journal of Investigative Dermatology 142 (6), 1607-1616, 2022 | 14 | 2022 |
