Rasmus Nielsen
TitleCited byYear
A draft sequence of the Neandertal genome
RE Green, J Krause, AW Briggs, T Maricic, U Stenzel, M Kircher, ...
science 328 (5979), 710-722, 2010
29702010
A metagenome-wide association study of gut microbiota in type 2 diabetes
J Qin, Y Li, Z Cai, S Li, J Zhu, F Zhang, S Liang, W Zhang, Y Guan, ...
Nature 490 (7418), 55, 2012
28602012
Bayesian inference of phylogeny and its impact on evolutionary biology
JP Huelsenbeck, F Ronquist, R Nielsen, JP Bollback
science 294 (5550), 2310-2314, 2001
25852001
Codon-substitution models for heterogeneous selection pressure at amino acid sites
Z Yang, R Nielsen, N Goldman, AMK Pedersen
Genetics 155 (1), 431-449, 2000
22322000
Evolution of genes and genomes on the Drosophila phylogeny
Drosophila 12 Genomes Consortium
Nature 450 (7167), 203, 2007
17782007
Bayes empirical Bayes inference of amino acid sites under positive selection
Z Yang, WSW Wong, R Nielsen
Molecular biology and evolution 22 (4), 1107-1118, 2005
17302005
Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene
R Nielsen, Z Yang
Genetics 148 (3), 929-936, 1998
16071998
Multilocus methods for estimating population sizes, migration rates and divergence time, with applications to the divergence of Drosophila pseudoobscura and D. persimilis
J Hey, R Nielsen
Genetics 167 (2), 747-760, 2004
13932004
Distinguishing migration from isolation: a Markov chain Monte Carlo approach
R Nielsen, J Wakeley
Genetics 158 (2), 885-896, 2001
13322001
Evaluation of an improved branch-site likelihood method for detecting positive selection at the molecular level
J Zhang, R Nielsen, Z Yang
Molecular biology and evolution 22 (12), 2472-2479, 2005
13262005
Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models
Z Yang, R Nielsen
Molecular biology and evolution 17 (1), 32-43, 2000
13262000
Molecular signatures of natural selection
R Nielsen
Annu. Rev. Genet. 39, 197-218, 2005
13222005
Evolutionary and biomedical insights from the rhesus macaque genome
RA Gibbs, J Rogers, MG Katze, R Bumgarner, GM Weinstock, ER Mardis, ...
Science 316 (5822), 222-234, 2007
11152007
Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages
Z Yang, R Nielsen
Molecular biology and evolution 19 (6), 908-917, 2002
11122002
Genotype and SNP calling from next-generation sequencing data
R Nielsen, JS Paul, A Albrechtsen, YS Song
Nature Reviews Genetics 12 (6), 443, 2011
11042011
The sequence and de novo assembly of the giant panda genome
R Li, W Fan, G Tian, H Zhu, L He, J Cai, Q Huang, Q Cai, B Li, Y Bai, ...
Nature 463 (7279), 311, 2010
10222010
The diploid genome sequence of an Asian individual
J Wang, W Wang, R Li, Y Li, G Tian, L Goodman, W Fan, J Zhang, J Li, ...
Nature 456 (7218), 60, 2008
10172008
Sequencing of 50 human exomes reveals adaptation to high altitude
X Yi, Y Liang, E Huerta-Sanchez, X Jin, ZXP Cuo, JE Pool, X Xu, H Jiang, ...
Science 329 (5987), 75-78, 2010
10122010
Integration within the Felsenstein equation for improved Markov chain Monte Carlo methods in population genetics
J Hey, R Nielsen
Proceedings of the National Academy of Sciences 104 (8), 2785-2790, 2007
9442007
A scan for positively selected genes in the genomes of humans and chimpanzees
R Nielsen, C Bustamante, AG Clark, S Glanowski, TB Sackton, MJ Hubisz, ...
PLoS biology 3 (6), e170, 2005
8722005
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Articles 1–20