Sasha Levy
Sasha Levy
CSO of BacStitch DNA
Verified email at
Cited by
Cited by
Quantitative evolutionary dynamics using high-resolution lineage tracking
SF Levy, JR Blundell, S Venkataram, DA Petrov, DS Fisher, G Sherlock
Nature 519 (7542), 181-186, 2015
Bet hedging in yeast by heterogeneous, age-correlated expression of a stress protectant
SF Levy, N Ziv, ML Siegal
PLoS biology 10 (5), e1001325, 2012
Network hubs buffer environmental variation in Saccharomyces cerevisiae
SF Levy, ML Siegal
PLoS biology 6 (11), e264, 2008
Somatodendritic microRNAs identified by laser capture and multiplex RT-PCR
MJ Kye, T Liu, SF Levy, NL Xu, BB Groves, R Bonneau, K Lao, KS Kosik
Rna 13 (8), 1224-1234, 2007
Development of a comprehensive genotype-to-fitness map of adaptation-driving mutations in yeast
S Venkataram, B Dunn, Y Li, A Agarwala, J Chang, ER Ebel, ...
Cell 166 (6), 1585-1596. e22, 2016
Three-and four-repeat tau regulate the dynamic instability of two distinct microtubule subpopulations in qualitatively different manners: implications for neurodegeneration
SF Levy, AC LeBoeuf, MR Massie, MA Jordan, L Wilson, SC Feinstein
Journal of Biological Chemistry 280 (14), 13520-13528, 2005
High-resolution lineage tracking reveals travelling wave of adaptation in laboratory yeast
AN Nguyen Ba, I Cvijović, JI Rojas Echenique, KR Lawrence, ...
Nature 575 (7783), 494-499, 2019
Gene architectures that minimize cost of gene expression
I Frumkin, D Schirman, A Rotman, F Li, L Zahavi, E Mordret, O Asraf, S Wu, ...
Molecular cell 65 (1), 142-153, 2017
Beyond genome sequencing: lineage tracking with barcodes to study the dynamics of evolution, infection, and cancer
JR Blundell, SF Levy
Genomics 104 (6), 417-430, 2014
Single-cell copy number variant detection reveals the dynamics and diversity of adaptation
S Lauer, G Avecilla, P Spealman, G Sethia, N Brandt, SF Levy, ...
PLoS biology 16 (12), e3000069, 2018
Bartender: a fast and accurate clustering algorithm to count barcode reads
L Zhao, Z Liu, SF Levy, S Wu
Bioinformatics 34 (5), 739-747, 2018
The dynamics of adaptive genetic diversity during the early stages of clonal evolution
JR Blundell, K Schwartz, D Francois, DS Fisher, G Sherlock, SF Levy
Nature ecology & evolution 3 (2), 293-301, 2019
A method for high‐throughput production of sequence‐verified DNA libraries and strain collections
JD Smith, U Schlecht, W Xu, S Suresh, J Horecka, MJ Proctor, RS Aiyar, ...
Molecular systems biology 13 (2), 913, 2017
Polygenic cis-regulatory adaptation in the evolution of yeast pathogenicity
HB Fraser, S Levy, A Chavan, HB Shah, JC Perez, Y Zhou, ML Siegal, ...
Genome research 22 (10), 1930-1939, 2012
The genotype‐phenotype landscape of an allosteric protein
DS Tack, PD Tonner, A Pressman, ND Olson, SF Levy, EF Romantseva, ...
Molecular systems biology 17 (3), e10179, 2021
FTDP-17 mutations in Tau alter the regulation of microtubule dynamics
AC LeBoeuf, SF Levy, M Gaylord, A Bhattacharya, AK Singh, MA Jordan, ...
Journal of Biological Chemistry 283 (52), 36406-36415, 2008
Histone variant HTZ1 shows extensive epistasis with, but does not increase robustness to, new mutations
JB Richardson, LD Uppendahl, MK Traficante, SF Levy, ML Siegal
PLoS genetics 9 (8), e1003733, 2013
A scalable double-barcode sequencing platform for characterization of dynamic protein-protein interactions
U Schlecht, Z Liu, JR Blundell, RP St. Onge, SF Levy
Nature communications 8 (1), 15586, 2017
iSeq: a new double-barcode method for detecting dynamic genetic interactions in yeast
M Jaffe, G Sherlock, SF Levy
G3: Genes, Genomes, Genetics 7 (1), 143-153, 2017
The robustness continuum
SF Levy, ML Siegal
Evolutionary systems biology, 431-452, 2012
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