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Eric C. Dykeman
Eric C. Dykeman
Verified email at york.ac.uk - Homepage
Title
Cited by
Cited by
Year
Solving a Levinthal's paradox for virus assembly identifies a unique antiviral strategy
EC Dykeman, PG Stockley, R Twarock
Proceedings of the National Academy of Sciences 111 (14), 5361-5366, 2014
1162014
Normal mode analysis and applications in biological physics
EC Dykeman, OF Sankey
Journal of Physics: Condensed Matter 22 (42), 423202, 2010
1122010
Packaging signals in single-stranded RNA viruses: nature’s alternative to a purely electrostatic assembly mechanism
PG Stockley, R Twarock, SE Bakker, AM Barker, A Borodavka, ...
Journal of biological physics 39, 277-287, 2013
1102013
Direct Evidence for Packaging Signal-Mediated Assembly of Bacteriophage MS2
Ó Rolfsson, S Middleton, IW Manfield, SJ White, B Fan, R Vaughan, ...
Journal of molecular biology 428 (2), 431-448, 2016
992016
Packaging signals in two single-stranded RNA viruses imply a conserved assembly mechanism and geometry of the packaged genome
EC Dykeman, PG Stockley, R Twarock
Journal of molecular biology 425 (17), 3235-3249, 2013
932013
HBV RNA pre-genome encodes specific motifs that mediate interactions with the viral core protein that promote nucleocapsid assembly.
N Patel, SJ White, RF Thompson, R Bingham, EU Weiß, DP Maskell, ...
Nature microbiology 2, 17098, 2017
852017
Revealing the density of encoded functions in a viral RNA
N Patel, EC Dykeman, RHA Coutts, GP Lomonossoff, DJ Rowlands, ...
Proceedings of the National Academy of Sciences 112 (7), 2227-2232, 2015
772015
Degenerate RNA packaging signals in the genome of satellite tobacco necrosis virus: implications for the assembly of a T= 1 capsid
DHJ Bunka, SW Lane, CL Lane, EC Dykeman, RJ Ford, AM Barker, ...
Journal of molecular biology 413 (1), 51-65, 2011
772011
Genomic RNA folding mediates assembly of human parechovirus
S Shakeel, EC Dykeman, SJ White, A Ora, JJB Cockburn, SJ Butcher, ...
Nature communications 8 (1), 1-11, 2017
762017
The impact of viral RNA on assembly pathway selection
VL Morton, EC Dykeman, NJ Stonehouse, AE Ashcroft, R Twarock, ...
Journal of molecular biology 401 (2), 298-308, 2010
742010
Protein-mediated RNA folding governs sequence-specific interactions between rotavirus genome segments
A Borodavka, EC Dykeman, W Schrimpf, DC Lamb
Elife 6, e27453, 2017
732017
Structural basis for DNA recognition and loading into a viral packaging motor
CR Büttner, M Chechik, M Ortiz-Lombardía, C Smits, IO Ebong, V Chechik, ...
Proceedings of the National Academy of Sciences 109 (3), 811-816, 2012
692012
Dynamic allostery controls coat protein conformer switching during MS2 phage assembly
EC Dykeman, PG Stockley, R Twarock
Journal of molecular biology 395 (5), 916-923, 2010
692010
Low frequency mechanical modes of viral capsids: an atomistic approach
EC Dykeman, OF Sankey
Physical review letters 100 (2), 028101, 2008
682008
Simple rules for efficient assembly predict the layout of a packaged viral RNA
EC Dykeman, NE Grayson, K Toropova, NA Ranson, PG Stockley, ...
Journal of molecular biology 408 (3), 399-407, 2011
672011
A modelling paradigm for RNA virus assembly
R Twarock, RJ Bingham, EC Dykeman, PG Stockley
Current opinion in virology 31, 74-81, 2018
622018
Building a viral capsid in the presence of genomic RNA
EC Dykeman, PG Stockley, R Twarock
Physical Review E 87 (2), 022717, 2013
582013
Cryo-EM structure and in vitro DNA packaging of a thermophilic virus with supersized T= 7 capsids
OW Bayfield, E Klimuk, DC Winkler, EL Hesketh, M Chechik, N Cheng, ...
Proceedings of the National Academy of Sciences 116 (9), 3556-3561, 2019
552019
Bacteriophage MS2 genomic RNA encodes an assembly instruction manual for its capsid
PG Stockley, SJ White, E Dykeman, I Manfield, O Rolfsson, N Patel, ...
Bacteriophage 6 (1), e1157666, 2016
512016
Identification of novel RNA secondary structures within the hepatitis C virus genome reveals a cooperative involvement in genome packaging
H Stewart, RJ Bingham, SJ White, EC Dykeman, C Zothner, AK Tuplin, ...
Scientific reports 6 (1), 1-12, 2016
502016
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