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Matthew W. Hahn
Matthew W. Hahn
Distinguished Professor of Biology and Computer Science, Indiana University
Verified email at indiana.edu - Homepage
Title
Cited by
Cited by
Year
Evolution of genes and genomes on the Drosophila phylogeny
AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ...
Nature 450 (7167), 203-218, 2007
22502007
Evolutionary and biomedical insights from the rhesus macaque genome
RA Gibbs, J Rogers, MG Katze, R Bumgarner, GM Weinstock, ER Mardis, ...
Science 316 (5822), 222-234, 2007
14722007
The evolution of transcriptional regulation in eukaryotes
GA Wray, MW Hahn, E Abouheif, JP Balhoff, M Pizer, MV Rockman, ...
Molecular biology and evolution 20 (9), 1377-1419, 2003
14032003
CAFE: a computational tool for the study of gene family evolution
T De Bie, N Cristianini, JP Demuth, MW Hahn
Bioinformatics 22 (10), 1269-1271, 2006
13932006
Sex Determination: Why So Many Ways of Doing It?
D Bachtrog, JE Mank, CL Peichel, M Kirkpatrick, SP Otto, TL Ashman, ...
PLOS Biology 12 (7), e1001899, 2014
11432014
Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow
TE Cruickshank, MW Hahn
Molecular ecology 23 (13), 3133-3157, 2014
10562014
Genomic islands of speciation in Anopheles gambiae
TL Turner, MW Hahn, SV Nuzhdin
PLoS Biology 3 (9), e285, 2005
8392005
Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans
DJ Begun, AK Holloway, K Stevens, LDW Hillier, YP Poh, MW Hahn, ...
PLoS Biology 5 (11), e310, 2007
7292007
Comparative genomics of centrality and essentiality in three eukaryotic protein-interaction networks
MW Hahn, AD Kern
Molecular biology and evolution 22 (4), 803-806, 2005
7182005
Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures
A Stark, MF Lin, P Kheradpour, JS Pedersen, L Parts, JW Carlson, ...
Nature 450 (7167), 219-232, 2007
7142007
Estimating gene gain and loss rates in the presence of error in genome assembly and annotation using CAFE 3
MV Han, GWC Thomas, J Lugo-Martinez, MW Hahn
Molecular biology and evolution 30 (8), 1987-1997, 2013
6992013
Comparative and demographic analysis of orang-utan genomes
DP Locke, LDW Hillier, WC Warren, KC Worley, LV Nazareth, DM Muzny, ...
Nature 469 (7331), 529-533, 2011
6902011
Extensive introgression in a malaria vector species complex revealed by phylogenomics
MC Fontaine, JB Pease, A Steele, RM Waterhouse, DE Neafsey, ...
Science 347 (6217), 1258524, 2015
6002015
Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes
DE Neafsey, RM Waterhouse, MR Abai, SS Aganezov, MA Alekseyev, ...
Science 347 (6217), 1258522, 2015
5832015
Random drift and culture change
RA Bentley, MW Hahn, SJ Shennan
Proceedings of the Royal Society of London B: Biological Sciences 271 (1547 …, 2004
5782004
How reticulated are species?
J Mallet, N Besansky, MW Hahn
BioEssays 38 (2), 140-149, 2016
5182016
Convergent evolution of the genomes of marine mammals
AD Foote, Y Liu, GWC Thomas, T Vinař, J Alföldi, J Deng, S Dugan, ...
Nature genetics 47 (3), 272-275, 2015
4232015
Gene family evolution across 12 Drosophila genomes
MW Hahn, MV Han, SG Han
PLoS genetics 3 (11), e197, 2007
4152007
New methods to calculate concordance factors for phylogenomic datasets
BQ Minh, MW Hahn, R Lanfear
Molecular biology and evolution 37 (9), 2727-2733, 2020
4102020
Phylogenomics reveals three sources of adaptive variation during a rapid radiation
JB Pease, DC Haak, MW Hahn, LC Moyle
PLoS biology 14 (2), e1002379, 2016
4052016
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