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Martin Swain
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A post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs
MT Swain, IJ Tsai, SA Assefa, C Newbold, M Berriman, TD Otto
Nature protocols 7 (7), 1260-1284, 2012
2132012
Genome Sequence of the Tsetse Fly (Glossina morsitans): Vector of African Trypanosomiasis
International Glossina Genome Initiative, GM Attardo, PP Abila, JE Auma, ...
Science 344 (6182), 380-386, 2014
2122014
Whole genome analysis of a schistosomiasis-transmitting freshwater snail
CM Adema, LDW Hillier, CS Jones, ES Loker, M Knight, P Minx, ...
Nature communications 8 (1), 1-12, 2017
1792017
Restriction and recruitment-gene duplication and the origin and evolution of snake venom toxins
AD Hargreaves, MT Swain, MJ Hegarty, DW Logan, JF Mulley
Genome Biology and Evolution 6 (8), 2088-2095, 2014
1402014
Protein and small non-coding RNA-enriched extracellular vesicles are released by the pathogenic blood fluke Schistosoma mansoni
FC Nowacki, MT Swain, OI Klychnikov, U Niazi, A Ivens, JF Quintana, ...
Journal of extracellular vesicles 4 (1), 28665, 2015
1322015
Grid-enabling data mining applications with DataMiningGrid: An architectural perspective
V Stankovski, M Swain, V Kravtsov, T Niessen, D Wegener, J Kindermann, ...
Future Generation Computer Systems 24 (4), 259-279, 2008
1202008
De novo assembly of red clover transcriptome based on RNA-Seq data provides insight into drought response, gene discovery and marker identification
SA Yates, MT Swain, MJ Hegarty, I Chernukin, M Lowe, GG Allison, ...
BMC genomics 15 (1), 1-15, 2014
1162014
Red clover (Trifolium pratense L.) draft genome provides a platform for trait improvement
JJ De Vega, S Ayling, M Hegarty, D Kudrna, JL Goicoechea, Ĺ Ergon, ...
Scientific reports 5 (1), 1-10, 2015
1152015
A metagenomic snapshot of taxonomic and functional diversity in an alpine glacier cryoconite ecosystem
A Edwards, JA Pachebat, M Swain, M Hegarty, AJ Hodson, ...
Environmental Research Letters 8 (3), 035003, 2013
1042013
Upgrading short-read animal genome assemblies to chromosome level using comparative genomics and a universal probe set
J Damas, R O'Connor, M Farré, VPE Lenis, HJ Martell, A Mandawala, ...
Genome research 27 (5), 875-884, 2017
892017
Presence of Extensive Wolbachia Symbiont Insertions Discovered in the Genome of Its Host Glossina morsitans morsitans
C Brelsfoard, G Tsiamis, M Falchetto, LM Gomulski, E Telleria, U Alam, ...
PLoS neglected tropical diseases 8 (4), e2728, 2014
77*2014
Testing the Toxicofera: comparative transcriptomics casts doubt on the single, early evolution of the reptile venom system
AD Hargreaves, MT Swain, DW Logan, JF Mulley
Toxicon 92, 140-156, 2014
752014
Correlation between bacterial G+ C content, genome size and the G+ C content of associated plasmids and bacteriophages
A Almpanis, M Swain, D Gatherer, N McEwan
Microbial genomics 4 (4), 2018
672018
Evolutionary genomics of anthroponosis in Cryptosporidium
JL Nader, TC Mathers, BJ Ward, JA Pachebat, MT Swain, G Robinson, ...
Nature microbiology 4 (5), 826-836, 2019
622019
Generation of whole genome sequences of new Cryptosporidium hominis and Cryptosporidium parvum isolates directly from stool samples
SJ Hadfield, JA Pachebat, MT Swain, G Robinson, SJS Cameron, ...
Bmc Genomics 16 (1), 1-12, 2015
562015
Comparative genomic analysis of six Glossina genomes, vectors of African trypanosomes
GM Attardo, AMM Abd-Alla, A Acosta-Serrano, JE Allen, R Bateta, ...
Genome biology 20 (1), 1-31, 2019
482019
Complex system simulations with qoscosgrid
K Kurowski, W de Back, W Dubitzky, L Gulyás, G Kampis, M Mamonski, ...
Computational Science–ICCS 2009, 387-396, 2009
462009
Epigenetic regulation of sex ratios may explain natural variation in self-fertilization rates
A Ellison, CM Rodriguez Lopez, P Moran, J Breen, M Swain, M Megias, ...
Proceedings of the Royal Society B: Biological Sciences 282 (1819), 20151900, 2015
442015
The importance of extracellular vesicle purification for downstream analysis: A comparison of differential centrifugation and size exclusion chromatography for helminth pathogens
CN Davis, H Phillips, JJ Tomes, MT Swain, TJ Wilkinson, PM Brophy, ...
PLoS neglected tropical diseases 13 (2), e0007191, 2019
412019
Transcriptional changes when Myxococcus xanthus preys on Escherichia coli suggest myxobacterial predators are constitutively toxic but regulate their feeding
PG Livingstone, AD Millard, MT Swain, DE Whitworth
Microbial genomics 4 (2), 2018
402018
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