|An expanded evaluation of protein function prediction methods shows an improvement in accuracy|
Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ...
Genome biology 17 (1), 1-19, 2016
|RNA target profiles direct the discovery of virulence functions for the cold-shock proteins CspC and CspE|
C Michaux, E Holmqvist, E Vasicek, M Sharan, L Barquist, ...
Proceedings of the National Academy of Sciences 114 (26), 6824-6829, 2017
|Functional high-throughput screening identifies the miR-15 microRNA family as cellular restriction factors for Salmonella infection|
C Maudet, M Mano, U Sunkavalli, M Sharan, M Giacca, KU Förstner, ...
Nature communications 5 (1), 4718, 2014
|Chlamydia preserves the mitochondrial network necessary for replication via microRNA-dependent inhibition of fission|
SR Chowdhury, A Reimer, M Sharan, V Kozjak-Pavlovic, A Eulalio, ...
Journal of Cell Biology 216 (4), 1071-1089, 2017
|Ten simple rules for organizing an unconference|
A Budd, H Dinkel, M Corpas, JC Fuller, L Rubinat, DP Devos, ...
PLoS computational biology 11 (1), e1003905, 2015
|Cell differentiation defines acute and chronic infection cell types in Staphylococcus aureus|
JC García-Betancur, A Goni-Moreno, T Horger, M Schott, M Sharan, ...
Elife 6, e28023, 2017
|A systematic analysis of the RNA-targeting potential of secreted bacterial effector proteins|
C Tawk, M Sharan, A Eulalio, J Vogel
Scientific reports 7 (1), 9328, 2017
|APRICOT: an integrated computational pipeline for the sequence-based identification and characterization of RNA-binding proteins|
M Sharan, KU Förstner, A Eulalio, J Vogel
Nucleic acids research 45 (11), e96-e96, 2017
|Functional screenings reveal different requirements for host microRNAs in Salmonella and Shigella infection|
C Aguilar, AR Cruz, I Rodrigues Lopes, C Maudet, U Sunkavalli, RJ Silva, ...
Nature microbiology 5 (1), 192-205, 2020
|Analysis of host microRNA function uncovers a role for miR-29b-2-5p in Shigella capture by filopodia|
U Sunkavalli, C Aguilar, RJ Silva, M Sharan, AR Cruz, C Tawk, C Maudet, ...
PLoS pathogens 13 (4), e1006327, 2017
|Centering inclusivity in the design of online conferences—An OHBM–Open Science perspective|
E Levitis, CDG Van Praag, R Gau, S Heunis, E DuPre, G Kiar, ...
GigaScience 10 (8), giab051, 2021
|Azimuthal separation in nearly back-to-back jet topologies in inclusive 2- and 3-jet events in collisions at |
AM Sirunyan, A Tumasyan, W Adam, F Ambrogi, E Asilar, T Bergauer, ...
The European Physical Journal C 79, 1-24, 2019
|Measurement of double-parton scattering in inclusive production of four jets with low transverse momentum in proton-proton collisions at s = 13 TeV|
A Tumasyan, W Adam, JW Andrejkovic, T Bergauer, S Chatterjee, ...
Journal of High Energy Physics 2022 (1), 1-61, 2022
|An intrinsically disordered proteins community for ELIXIR|
NE Davey, MM Babu, M Blackledge, A Bridge, S Capella-Gutierrez, ...
F1000Research 8, 2019
|morFeus: a web-based program to detect remotely conserved orthologs using symmetrical best hits and orthology network scoring|
I Wagner, M Volkmer, M Sharan, JM Villaveces, F Oswald, ...
BMC bioinformatics 15, 1-11, 2014
|Ten simple rules for establishing a mentorship programme|
AM Treasure, SM Hall, I Lesko, D Moore, M Sharan, M van Zaanen, ...
PLoS computational biology 18 (5), e1010015, 2022
|Enhancing the inclusivity and accessibility of your online calls|
Y Yehudi, KS Whitney, M Sharan
OSF Preprints, 2020
|The de. NBI/ELIXIR-DE training platform-Bioinformatics training in Germany and across Europe within ELIXIR|
D Wibberg, B Batut, P Belmann, J Blom, FO Glöckner, B Grüning, ...
F1000Research 8, 2019
|BOSC 2021, the 22nd Annual Bioinformatics Open Source Conference|
NL Harris, PJA Cock, CJ Fields, K Hokamp, J Maia, M Munoz-Torres, ...
F1000Research 10, 2021
|Conserved SQ and QS motifs in bacterial effectors suggest pathogen interplay with the ATM kinase family during infection|
D Sampietro, H Sámano-Sánchez, NE Davey, M Sharan, B Mészáros, ...
bioRxiv, 364117, 2018