| CATH: increased structural coverage of functional space I Sillitoe, N Bordin, N Dawson, VP Waman, P Ashford, HM Scholes, ... Nucleic acids research 49 (D1), D266-D273, 2021 | 303 | 2021 |
| SARS-CoV-2 spike protein predicted to form complexes with host receptor protein orthologues from a broad range of mammals SD Lam, N Bordin, VP Waman, HM Scholes, P Ashford, N Sen, ... Scientific reports 10 (1), 16471, 2020 | 152 | 2020 |
| Analysis of genotype diversity and evolution of Dengue virus serotype 2 using complete genomes VP Waman, P Kolekar, MR Ramtirthkar, MM Kale, U Kulkarni-Kale PeerJ 4, e2326, 2016 | 76 | 2016 |
| Molecular mechanisms associated with Fluconazole resistance in clinical Candida albicans isolates from India A Mane, P Vidhate, C Kusro, V Waman, V Saxena, U Kulkarni‐Kale, ... Mycoses 59 (2), 93-100, 2016 | 65 | 2016 |
| Population Structure and Evolution of Rhinoviruses VP Waman, PS Kolekar, MM Kale, U Kulkarni-Kale PloS one 9 (2), e88981, 2014 | 53 | 2014 |
| AlphaFold2 reveals commonalities and novelties in protein structure space for 21 model organisms N Bordin, I Sillitoe, V Nallapareddy, C Rauer, SD Lam, VP Waman, N Sen, ... Communications biology 6 (1), 160, 2023 | 51 | 2023 |
| The impact of structural bioinformatics tools and resources on SARS-CoV-2 research and therapeutic strategies VP Waman, N Sen, M Varadi, A Daina, SJ Wodak, V Zoete, S Velankar, ... Briefings in Bioinformatics 22 (2), 742-768, 2021 | 36 | 2021 |
| Mycobacterial genomics and structural bioinformatics: opportunities and challenges in drug discovery VP Waman, SC Vedithi, SE Thomas, BP Bannerman, A Munir, MJ Skwark, ... Emerging Microbes & Infections 8 (1), 109-118, 2019 | 33 | 2019 |
| Genetic diversity and evolution of dengue virus serotype 3: a comparative genomics study VP Waman, MM Kale, U Kulkarni-Kale Infection, Genetics and Evolution 49, 234-240, 2017 | 25 | 2017 |
| Population genomics of dengue virus serotype 4: insights into genetic structure and evolution VP Waman, SM Kasibhatla, MM Kale, U Kulkarni-Kale Archives of Virology 161, 2133-2148, 2016 | 24 | 2016 |
| CATHe: Detection of remote homologues for CATH superfamilies using embeddings from protein language models V Nallapareddy, N Bordin, I Sillitoe, M Heinzinger, M Littmann, VP Waman, ... Bioinformatics 39 (1), btad029, 2023 | 23 | 2023 |
| Computational approaches to predict protein functional families and functional sites C Rauer, N Sen, VP Waman, M Abbasian, CA Orengo Current Opinion in Structural Biology 70, 108-122, 2021 | 19 | 2021 |
| HARP: a database of structural impacts of systematic missense mutations in drug targets of Mycobacterium leprae SC Vedithi, S Malhotra, MJ Skwark, A Munir, M Acebrón-García-De-Eulate, ... Computational and Structural Biotechnology Journal 18, 3692-3704, 2020 | 18 | 2020 |
| Analysis of Next-generation Sequencing Data in Virology - Opportunities and Challenges MMKUKK Sunitha M. Kasibhatla, Vaishali P. Waman "Next Generation Sequencing - Advances, Applications and Challenges", book …, 2016 | 10* | 2016 |
| Insertions in the sars-cov-2 spike n-terminal domain may aid covid-19 transmission SD Lam, VP Waman, C Orengo, J Lees bioRxiv, 2021.12. 06.471394, 2021 | 9 | 2021 |
| RV-Typer: A Web Server for Typing of Rhinoviruses Using Alignment-Free Approach PS Kolekar, VP Waman, MM Kale, U Kulkarni-Kale Plos one 11 (2), e0149350, 2016 | 6 | 2016 |
| Genome to vaccinome: role of bioinformatics, immunoinformatics & comparative genomics U Kulkarni-Kale, V Waman, S Raskar, S Mehta, S Saxena Current Bioinformatics 7 (4), 454-466, 2012 | 5 | 2012 |
| Analysis of genotype diversity and evolution of Dengue virus serotype 2 using complete genomes. PeerJ. 2016; 4: e2326 VP Waman, P Kolekar, MR Ramtirthkar, MM Kale, U Kulkarni-Kale | 5 | |
| SARS-CoV-2 spike protein predicted to form complexes with host receptor protein orthologues from a broad range of mammals. Sci Rep 10: 16471 SD Lam, N Bordin, VP Waman, HM Scholes, P Ashford, N Sen, ... | 4 | 2020 |
| Analysis of metabolic pathways in mycobacteria to aid drug-target identification BP Bannerman, SC Vedithi, J Júlvez, P Torres, VP Waman, A Munir, ... bioRxiv, 535856, 2019 | 3 | 2019 |
Dr. Urmila Kulkarni-KaleInformation Scientist, Bioinformatics Centre, Savitribai Phule Pune University (former Univ of Pune)Verified email at bioinfo.net.in
