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Zhian Namir Kamvar
Zhian Namir Kamvar
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Poppr: an R package for genetic analysis of populations with clonal, partially clonal, and/or sexual reproduction
ZN Kamvar, JF Tabima, NJ Grünwald
PeerJ 2, e281, 2014
26232014
Novel R tools for analysis of genome-wide population genetic data with emphasis on clonality
ZN Kamvar, JC Brooks, NJ Grünwald
Frontiers in genetics 6, 151034, 2015
8152015
Improved inference of time-varying reproduction numbers during infectious disease outbreaks
RN Thompson, JE Stockwin, RD van Gaalen, JA Polonsky, ZN Kamvar, ...
Epidemics 29, 100356, 2019
4642019
Outbreak analytics: a developing data science for informing the response to emerging pathogens
JA Polonsky, A Baidjoe, ZN Kamvar, A Cori, K Durski, WJ Edmunds, ...
Philosophical Transactions of the Royal Society B 374 (1776), 20180276, 2019
1642019
Best practices for population genetic analyses
NJ Grünwald, SE Everhart, BJ Knaus, ZN Kamvar
Phytopathology 107 (9), 1000-1010, 2017
1192017
EpiEstim: estimate time varying reproduction numbers from epidemic curves
A Cori, S Cauchemez, NM Ferguson, C Fraser, E Dahlqwist, PA Demarsh, ...
R package version 2 (1), 2019
752019
Spatial and temporal analysis of populations of the sudden oak death pathogen in Oregon forests
ZN Kamvar, MM Larsen, AM Kanaskie, EM Hansen, NJ Grünwald
Phytopathology 105 (7), 982-989, 2015
722015
Epidemic curves made easy using the R package incidence
ZN Kamvar, J Cai, JRC Pulliam, J Schumacher, T Jombart
F1000Research 8, 2019
512019
Adegenet: exploratory analysis of genetic and genomic data
T Jombart, ZN Kamvar, C Collins, R Lustrik, MP Beugin, BJ Knaus, ...
Doc. Ophthalmol 107, 13-36, 2018
442018
First Report of the EU1 Clonal Lineage of Phytophthora ramorum on Tanoak in an Oregon Forest
NJ Grünwald, MM Larsen, ZN Kamvar, PW Reeser, A Kanaskie, J Laine, ...
Plant Disease 100 (5), 1024-1024, 2016
382016
Population structure and phenotypic variation of Sclerotinia sclerotiorum from dry bean (Phaseolus vulgaris) in the United States
ZN Kamvar, BS Amaradasa, R Jhala, S McCoy, JR Steadman, ...
PeerJ 5, e4152, 2017
372017
Developing educational resources for population genetics in R: an open and collaborative approach
ZN Kamvar, MM López‐Uribe, S Coughlan, NJ Grünwald, H Lapp, ...
Molecular Ecology Resources 17 (1), 120-128, 2017
302017
Package ‘adegenet’
T Jombart, ZN Kamvar, C Collins, R Lustrik, MP Beugin, BJ Knaus, ...
Github repository:< https://github. com/thibautjombart/adegenet, 2018
292018
Involving undergraduates in the annotation and analysis of global gene expression studies: creation of a maize shoot apical meristem expression database
B Buckner, J Beck, K Browning, A Fritz, L Grantham, E Hoxha, Z Kamvar, ...
Genetics 176 (2), 741-747, 2007
282007
Package ggrepel
K Slowikowski, A Schep, S Hughes, S Lukauskas, JO Irisson, ZN Kamvar, ...
Automatically position non-overlapping text labels with ‘ggplot2, 2018
272018
Population Structure of Pythium irregulare, P. ultimum, and P. sylvaticum in Forest Nursery Soils of Oregon and Washington
JE Weiland, P Garrido, ZN Kamvar, AS Espíndola, SM Marek, ...
Phytopathology 105 (5), 684-694, 2015
242015
apex: phylogenetics with multiple genes
T Jombart, F Archer, K Schliep, Z Kamvar, R Harris, E Paradis, J Goudet, ...
Molecular ecology resources 17 (1), 19-26, 2017
232017
Package ‘EpiEstim’
A Cori, S Cauchemez, NM Ferguson, C Fraser, E Dahlqwist, PA Demarsh, ...
CRAN: Vienna Austria 13, 2020
182020
Spontaneous and Fungicide-Induced Genomic Variation in Sclerotinia sclerotiorum
N Gambhir, ZN Kamvar, R Higgins, BS Amaradasa, SE Everhart
Phytopathology® 111 (1), 160-169, 2021
162021
Differential aggressiveness of Sclerotinia sclerotiorum isolates from North and South America and partial host resistance in Brazilian soybean and dry bean cultivars
TJJ Miorini, ZN Kamvar, RS Higgins, CG Raetano, JR Steadman, ...
Tropical plant pathology 44 (1), 73-81, 2019
152019
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Articles 1–20