The size of the human proteome: the width and depth EA Ponomarenko, EV Poverennaya, EV Ilgisonis, MA Pyatnitskiy, ... International journal of analytical chemistry 2016, 2016 | 328 | 2016 |
PPLine: an automated pipeline for SNP, SAP, and splice variant detection in the context of proteogenomics GS Krasnov, AA Dmitriev, AV Kudryavtseva, AV Shargunov, DS Karpov, ... Journal of proteome research 14 (9), 3729-3737, 2015 | 76 | 2015 |
Chromosome 18 transcriptome profiling and targeted proteome mapping in depleted plasma, liver tissue and HepG2 cells VG Zgoda, AT Kopylov, OV Tikhonova, AA Moisa, NV Pyndyk, ... Journal of Proteome Research 12 (1), 123-134, 2013 | 75 | 2013 |
Profiling proteoforms: promising follow-up of proteomics for biomarker discovery A Lisitsa, S Moshkovskii, A Chernobrovkin, E Ponomarenko, A Archakov Expert review of proteomics 11 (1), 121-129, 2014 | 74 | 2014 |
Quest for missing proteins: update 2015 on chromosome-centric human proteome project P Horvatovich, EK Lundberg, YJ Chen, TY Sung, F He, EC Nice, ... Journal of proteome research 14 (9), 3415-3431, 2015 | 62 | 2015 |
Chromosome-centric approach to overcoming bottlenecks in the Human Proteome Project A Archakov, V Zgoda, A Kopylov, S Naryzhny, A Chernobrovkin, ... Expert review of proteomics 9 (6), 667-676, 2012 | 55 | 2012 |
Gene‐centric view on the human proteome project: The example of the Russian roadmap for chromosome 18 A Archakov, A Aseev, V Bykov, A Grigoriev, V Govorun, V Ivanov, ... Proteomics 11 (10), 1853-1856, 2011 | 54 | 2011 |
Chromosome 18 transcriptoproteome of liver tissue and HepG2 cells and targeted proteome mapping in depleted plasma: update 2013 EA Ponomarenko, AT Kopylov, AV Lisitsa, SP Radko, YY Kiseleva, ... Journal of proteome research 13 (1), 183-190, 2014 | 52 | 2014 |
Proteomics of mouse liver microsomes: Performance of different protein separation workflows for LC‐MS/MS VG Zgoda, SA Moshkovskii, EA Ponomarenko, TV Andreewski, ... Proteomics 9 (16), 4102-4105, 2009 | 47 | 2009 |
Targeted quantitative screening of chromosome 18 encoded proteome in plasma samples of astronaut candidates AT Kopylov, EV Ilgisonis, AA Moysa, OV Tikhonova, MG Zavialova, ... Journal of Proteome Research 15 (11), 4039-4046, 2016 | 38 | 2016 |
Combination of virtual and experimental 2DE together with ESI LC‐MS/MS gives a clearer view about proteomes of human cells and plasma SN Naryzhny, VG Zgoda, MA Maynskova, SE Novikova, NL Ronzhina, ... Electrophoresis 37 (2), 302-309, 2016 | 35 | 2016 |
State of the art of chromosome 18-Centric HPP in 2016: transcriptome and proteome profiling of liver tissue and HepG2 cells EV Poverennaya, AT Kopylov, EA Ponomarenko, EV Ilgisonis, VG Zgoda, ... Journal of Proteome Research 15 (11), 4030-4038, 2016 | 29 | 2016 |
2DE‐based approach for estimation of number of protein species in a cell SN Naryzhny, AV Lisitsa, VG Zgoda, EA Ponomarenko, AI Archakov Electrophoresis 35 (6), 895-900, 2014 | 29 | 2014 |
Recent advances in proteomic profiling of human blood: clinical scope A Archakov, A Lisitsa, E Ponomarenko, V Zgoda Expert Review of Proteomics 12 (2), 111-113, 2015 | 26 | 2015 |
Electrochemical reduction of sterol-14α-demethylase from Mycobacterium tuberculosis (CYP51b1) VV Shumyantseva, TV Bulko, GP Kuznetsova, AV Lisitsa, ... Biochemistry (Moscow) 72, 658-663, 2007 | 26 | 2007 |
Mass spectrometry-based metabolomics analysis of obese patients’ blood plasma PG Lokhov, EE Balashova, OP Trifonova, DL Maslov, EA Ponomarenko, ... International journal of molecular sciences 21 (2), 568, 2020 | 25 | 2020 |
200+ protein concentrations in healthy human blood plasma: Targeted quantitative SRM SIS screening of chromosomes 18, 13, Y, and the mitochondrial chromosome encoded proteome AT Kopylov, EA Ponomarenko, EV Ilgisonis, MA Pyatnitskiy, AV Lisitsa, ... Journal of proteome research 18 (1), 120-129, 2018 | 24 | 2018 |
Why are the correlations between mRNA and protein levels so low among the 275 predicted protein-coding genes on human chromosome 18? EV Poverennaya, EV Ilgisonis, EA Ponomarenko, AT Kopylov, VG Zgoda, ... Journal of Proteome Research 16 (12), 4311-4318, 2017 | 23 | 2017 |
Postgenomic medicine: Alternative to biomarkers AV Lisitsa, EA Ponomarenko, PG Lokhov, AI Archakov Annals of the Russian academy of medical sciences 71 (3), 2016 | 21 | 2016 |
Prediction of monomeric and dimeric structures of CYP102A1 using AlphaFold2 and AlphaFold multimer and assessment of point mutation effect on the efficiency of intra-and … YD Ivanov, A Taldaev, AV Lisitsa, EA Ponomarenko, AI Archakov Molecules 27 (4), 1386, 2022 | 20 | 2022 |