| Rapid inference of antibiotic resistance and susceptibility by genomic neighbour typing K Břinda, A Callendrello, KC Ma, DR MacFadden, T Charalampous, ... Nature microbiology 5 (3), 455-464, 2020 | 95 | 2020 |
| Population genomics of Mycobacterium tuberculosis in the Inuit RS Lee, N Radomski, JF Proulx, I Levade, BJ Shapiro, F McIntosh, ... Proceedings of the National Academy of Science, 2015 | 92 | 2015 |
| Re-emergence and Amplification of Tuberculosis in the Canadian Arctic RS Lee, N Radomski, JF Proulx, J Manry, F McIntosh, F Desjardins, ... The Journal of Infectious Diseases, 2015 | 82 | 2015 |
| Genomic epidemiology and antimicrobial resistance of Neisseria gonorrhoeae in New Zealand RS Lee, T Seemann, H Heffernan, JC Kwong, A Gonçalves da Silva, ... Journal of Antimicrobial Chemotherapy 73 (2), 353-364, 2018 | 78 | 2018 |
| Real-time sequencing of Mycobacterium tuberculosis: are we there yet? RS Lee, M Pai Journal of Clinical Microbiology, 10.1128/JCM.00358-17, 2017 | 56 | 2017 |
| Previously undetected superspreading of Mycobacterium tuberculosis revealed by deep sequencing RS Lee, JF Proulx, F McIntosh, MA Behr, WP Hanage eLife, https://elifesciences.org/articles/53245, 2020 | 48 | 2020 |
| The implications of whole genome sequencing in the control of tuberculosis RS Lee, MA Behr Therapeutic Advances in Infectious Disease, DOI:10.1177/2049936115624630, 2015 | 47 | 2015 |
| Inadequate Diet Is Associated with Acquiring Mycobacterium tuberculosis Infection in an Inuit Community. A Case–Control Study GJ Fox, RS Lee, M Lucas, FA Khan, JF Proulx, K Hornby, S Jung, ... Annals of the American Thoracic Society 12 (8), 1153-1162, 2015 | 44 | 2015 |
| The changing landscape of vancomycin-resistant Enterococcus faecium in Australia: a population-level genomic study RS Lee, A Gonçalves da Silva, SL Baines, J Strachan, S Ballard, ... Journal of Antimicrobial Chemotherapy 73 (12), 3268-3278, 2018 | 38 | 2018 |
| Housing and tuberculosis in an Inuit village in northern Quebec: a case-control study FA Khan, GJ Fox, RS Lee, M Riva, A Benedetti, JF Proulx, S Jung, ... Canadian Medical Association Open Access Journal 4 (3), E496-E506, 2016 | 35 | 2016 |
| Does choice matter? reference-based alignment for molecular epidemiology of tuberculosis RS Lee, MA Behr Journal of Clinical Microbiology, pii: JCM.00364-16, 2016 | 31 | 2016 |
| Progression to tuberculosis disease increases with multiple exposures RS Lee, JF Proulx, D Menzies, MA Behr European Respiratory Journal 48 (6), 1682-1689, 2016 | 30 | 2016 |
| Chapter 1: Epidemiology of tuberculosis in Canada A Mounchili, R Perera, RS Lee, H Njoo, J Brooks Canadian Journal of Respiratory, Critical Care, and Sleep Medicine 6 (sup1 …, 2022 | 27 | 2022 |
| Beta-lactam/beta-lactamase inhibitor therapy for potential AmpC-producing organisms: a systematic review and meta-analysis MP Cheng, RS Lee, AP Cheng, S De L’Étoile-Morel, K Demir, ... Open forum infectious diseases 6 (7), ofz248, 2019 | 24 | 2019 |
| Within-host Mycobacterium tuberculosis diversity and its utility for inferences of transmission MA Martin, RS Lee, LA Cowley, JL Gardy, WP Hanage Microbial Genomics 4 (10), e000217, 2018 | 24 | 2018 |
| Pilot study of a combined genomic and epidemiologic surveillance program for hospital-acquired multidrug-resistant pathogens across multiple hospital networks in Australia NL Sherry, RS Lee, CL Gorrie, JC Kwong, RL Stuart, TM Korman, ... Infection Control & Hospital Epidemiology 42 (5), 573-581, 2021 | 20 | 2021 |
| Multi-site implementation of whole genome sequencing for hospital infection control: a prospective genomic epidemiological analysis NL Sherry, CL Gorrie, JC Kwong, C Higgs, RL Stuart, C Marshall, ... The Lancet Regional Health–Western Pacific 23, 2022 | 17 | 2022 |
| Chapter 3: Diagnosis of tuberculosis disease and drug-resistant tuberculosis MA Behr, SG Lapierre, DY Kunimoto, RS Lee, R Long, I Sekirov, ... Canadian Journal of Respiratory, Critical Care, and Sleep Medicine 6 (sup1 …, 2022 | 16 | 2022 |
| Genomic epidemiology of Mycobacterium abscessus in a Canadian cystic fibrosis centre N Waglechner, E Tullis, AL Stephenson, V Waters, F McIntosh, J Ma, ... Scientific Reports 12 (1), 16116, 2022 | 15 | 2022 |
| Estimating the relative probability of direct transmission between infectious disease patients SV Leavitt, RS Lee, P Sebastiani, CR Horsburgh Jr, HE Jenkins, LF White International journal of epidemiology 49 (3), 764-775, 2020 | 15 | 2020 |
