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Vipul Singhal
Vipul Singhal
Senior Scientist, Genome Institute of Singapore
Verified email at gis.a-star.edu.sg
Title
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Cited by
Year
Rapidly characterizing the fast dynamics of RNA genetic circuitry with cell-free transcription–translation (TX-TL) systems
MK Takahashi, J Chappell, CA Hayes, ZZ Sun, J Kim, V Singhal, ...
ACS synthetic biology 4 (5), 503-515, 2015
1732015
DUBStepR is a scalable correlation-based feature selection method for accurately clustering single-cell data
B Ranjan, W Sun, J Park, K Mishra, F Schmidt, R Xie, F Alipour, V Singhal, ...
Nature Communications 12 (1), 5849, 2021
372021
An in silico modeling toolbox for rapid prototyping of circuits in a biomolecular “breadboard” system
ZA Tuza, V Singhal, J Kim, RM Murray
52nd IEEE Conference on Decision and Control, 1404-1410, 2013
322013
Protein degradation in a TX-TL cell-free expression system using ClpXP protease
ZZ Sun, J Kim, V Singhal, RM Murray
BioRxiv, 019695, 2015
122015
BANKSY: a spatial omics algorithm that unifies cell type clustering and tissue domain segmentation
V Singhal, N Chou, J Lee, J Liu, WK Chock, L Lin, YC Chang, E Teo, ...
bioRxiv, 2022.04. 14.488259, 2022
112022
A MATLAB toolbox for modeling genetic circuits in cell-free systems
V Singhal, ZA Tuza, ZZ Sun, RM Murray
Synthetic Biology 6 (1), ysab007, 2021
92021
DUBStepR: correlation-based feature selection for clustering single-cell RNA sequencing data
B Ranjan, W Sun, J Park, K Mishra, R Xie, F Alipour, V Singhal, F Schmidt, ...
bioRxiv, 2020.10. 07.330563, 2020
52020
Rapidly characterizing the fast dynamics of RNA genetic circuitry with cell-free transcription-translation (TX-TL) systems. ACS Synth Biol. 2015; 4 (5): 503–15
MK Takahashi, J Chappell, CA Hayes, ZZ Sun, J Kim, V Singhal, ...
Epub 2014/03/14. https://doi. org/10.1021/sb400206c PMID: 24621257, 0
5
Modeling, Computation, and Characterization to Accelerate the Development of Synthetic Gene Circuits in Cell-Free Extracts
V Singhal
California Institute of Technology, 2019
32019
Recursively constructing analytic expressions for equilibrium distributions of stochastic biochemical reaction networks
XF Meng, AA Baetica, V Singhal, RM Murray
Journal of The Royal Society Interface 14 (130), 20170157, 2017
32017
Transforming Data Across Environments Despite Structural Non-Identifiability
V Singhal, RM Murray
2019 American Control Conference (ACC), 5639-5646, 2019
22019
BANKSY unifies cell typing and tissue domain segmentation for scalable spatial omics data analysis
V Singhal, N Chou, J Lee, Y Yue, J Liu, WK Chock, L Lin, YC Chang, ...
Nature Genetics, 1-11, 2024
12024
Cell-free biomolecular breadboards and related methods and arrangements
RM Murray, V Singhal
US Patent 11,004,536, 2021
12021
Erratum to: A MATLAB toolbox for modeling genetic circuits in cell-free systems
V Singhal, ZA Tuza, ZZ Sun, RM Murray
Synthetic Biology 6 (1), ysab016, 2021
2021
System composability and behavior prediction of genetic networks from characterized models of subsystems
V Singhal
Supplementary Information for A MATLAB Toolbox for Modeling Genetic Circuits in Cell-Free Systems
V Singhal, ZA Tuza, ZZ Sun, RM Murray
Cell-Free Extract Data Variability Reduction in the Presence of Structural Non-Identifiability
V Singhal, RM Murray
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