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Anthony J. Cesnik
Anthony J. Cesnik
Postdoctoral Researcher, Stanford University
Verified email at stanford.edu - Homepage
Title
Cited by
Cited by
Year
Spatiotemporal dissection of the cell cycle with single-cell proteogenomics
D Mahdessian, AJ Cesnik, C Gnann, F Danielsson, L Stenstr÷m, M Arif, ...
Nature 590 (7847), 649-654, 2021
1162021
Proteogenomics: integrating next-generation sequencing and mass spectrometry to characterize human proteomic variation
GM Sheynkman, MR Shortreed, AJ Cesnik, LM Smith
Annual review of analytical chemistry 9, 521-545, 2016
1162016
Analysis of the human protein atlas image classification competition
W Ouyang, CF Winsnes, M Hjelmare, AJ Cesnik, L ┼kesson, H Xu, ...
Nature methods 16 (12), 1254-1261, 2019
1012019
Mapping the nucleolar proteome reveals a spatiotemporal organization related to intrinsic protein disorder
L Stenstr÷m, D Mahdessian, C Gnann, AJ Cesnik, W Ouyang, ...
Molecular systems biology 16 (8), e9469, 2020
1002020
The Blood Proteoform Atlas: A reference map of proteoforms in human hematopoietic cells
RD Melani, VR Gerbasi, LC Anderson, JW Sikora, TK Toby, JE Hutton, ...
Science 375 (6579), 411-418, 2022
642022
HyPR-MS for multiplexed discovery of MALAT1, NEAT1, and NORAD lncRNA protein interactomes
M Spiniello, RA Knoener, MI Steinbrink, B Yang, AJ Cesnik, KE Buxton, ...
Journal of proteome research 17 (9), 3022-3038, 2018
562018
Elucidating proteoform families from proteoform intact-mass and lysine-count measurements
MR Shortreed, BL Frey, M Scalf, RA Knoener, AJ Cesnik, LM Smith
Journal of proteome research 15 (4), 1213-1221, 2016
482016
ProForma: a standard proteoform notation
RD LeDuc, V Schwämmle, MR Shortreed, AJ Cesnik, SK Solntsev, ...
Journal of proteome research 17 (3), 1321-1325, 2018
452018
Proteoform Suite: Software for constructing, quantifying, and visualizing proteoform families
AJ Cesnik, MR Shortreed, LV Schaffer, RA Knoener, BL Frey, M Scalf, ...
Journal of proteome research 17 (1), 568-578, 2018
452018
Human proteomic variation revealed by combining RNA-Seq proteogenomics and global post-translational modification (G-PTM) search strategy
AJ Cesnik, MR Shortreed, GM Sheynkman, BL Frey, LM Smith
Journal of proteome research 15 (3), 800-808, 2016
352016
Elucidating Escherichia coli Proteoform Families Using Intact-Mass Proteomics and a Global PTM Discovery Database
Y Dai, MR Shortreed, M Scalf, BL Frey, AJ Cesnik, S Solntsev, LV Schaffer, ...
Journal of proteome research 16 (11), 4156-4165, 2017
342017
Identification and quantification of murine mitochondrial proteoforms using an integrated top-down and intact-mass strategy
LV Schaffer, JW Rensvold, MR Shortreed, AJ Cesnik, A Jochem, M Scalf, ...
Journal of proteome research 17 (10), 3526-3536, 2018
292018
Spritz: a proteogenomic database engine
AJ Cesnik, RM Miller, K Ibrahim, L Lu, RJ Millikin, MR Shortreed, BL Frey, ...
Journal of proteome research 20 (4), 1826-1834, 2020
282020
Expanding proteoform identifications in top-down proteomic analyses by constructing proteoform families
LV Schaffer, MR Shortreed, AJ Cesnik, BL Frey, SK Solntsev, M Scalf, ...
Analytical chemistry 90 (2), 1325-1333, 2018
282018
Proteomics in non-human primates: utilizing RNA-Seq data to improve protein identification by mass spectrometry in vervet monkeys
JM Proffitt, J Glenn, AJ Cesnik, A Jadhav, MR Shortreed, LM Smith, ...
BMC genomics 18 (1), 1-10, 2017
172017
Electrochemical Synthesis of Binary and Ternary Niobium-Containing Oxide Electrodes Using the p-Benzoquinone/Hydroquinone Redox Couple
CM Papa, AJ Cesnik, TC Evans, KS Choi
Langmuir 31 (34), 9502-9510, 2015
172015
Comprehensive in vivo identification of the c-Myc mRNA protein interactome using HyPR-MS
M Spiniello, MI Steinbrink, AJ Cesnik, RM Miller, M Scalf, MR Shortreed, ...
RNA 25 (10), 1337-1352, 2019
162019
Proteomics Standards Initiative’s ProForma 2.0: Unifying the encoding of proteoforms and peptidoforms
RD LeDuc, EW Deutsch, PA Binz, RT Fellers, AJ Cesnik, JA Klein, ...
Journal of proteome research 21 (4), 1189-1195, 2022
142022
HyCCAPP as a tool to characterize promoter DNA-protein interactions in Saccharomyces cerevisiae
H Guillen-Ahlers, PK Rao, ME Levenstein, J Kennedy-Darling, ...
Genomics 107 (6), 267-273, 2016
142016
Bento: A toolkit for subcellular analysis of spatial transcriptomics data
CK Mah, N Ahmed, N Lopez, D Lam, A Monell, C Kern, Y Han, G Prasad, ...
BioRxiv, 2022.06. 10.495510, 2022
132022
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