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James B Procter
James B Procter
Other namesJim Procter, James Procter
College of Life Sciences, University of Dundee.
Verified email at dundee.ac.uk
Title
Cited by
Cited by
Year
Jalview Version 2—a multiple sequence alignment editor and analysis workbench
AM Waterhouse, JB Procter, DMA Martin, M Clamp, GJ Barton
Bioinformatics 25 (9), 1189-1191, 2009
99952009
JPred4: a protein secondary structure prediction server
A Drozdetskiy, C Cole, J Procter, GJ Barton
Nucleic acids research 43 (W1), W389-W394, 2015
19502015
Visualizing biological data—now and in the future
SI O'Donoghue, AC Gavin, N Gehlenborg, DS Goodsell, JK Hériché, ...
Nature methods 7 (3), S2-S4, 2010
1912010
Phosphoproteomic screening identifies Rab GTP ases as novel downstream targets of PINK 1
YC Lai, C Kondapalli, R Lehneck, JB Procter, BD Dill, HI Woodroof, ...
The EMBO journal 34 (22), 2840-2861, 2015
1902015
MSAViewer: interactive JavaScript visualization of multiple sequence alignments
G Yachdav, S Wilzbach, B Rauscher, R Sheridan, I Sillitoe, J Procter, ...
Bioinformatics 32 (22), 3501-3503, 2016
1882016
Ten simple rules for the open development of scientific software
A Prlić, JB Procter
PLoS computational biology 8 (12), e1002802, 2012
1682012
Java bioinformatics analysis web services for multiple sequence alignment—JABAWS: MSA
PV Troshin, JB Procter, GJ Barton
Bioinformatics 27 (14), 2001-2002, 2011
1322011
Alignment of biological sequences with Jalview
JB Procter, GM Carstairs, B Soares, K Mourão, TC Ofoegbu, D Barton, ...
Multiple Sequence Alignment: Methods and Protocols, 203-224, 2021
1292021
Distinct donor and acceptor specificities of Trypanosoma brucei oligosaccharyltransferases
L Izquierdo, BL Schulz, JA Rodrigues, MLS Güther, JB Procter, GJ Barton, ...
The EMBO journal 28 (17), 2650-2661, 2009
1292009
Visualization of multiple alignments, phylogenies and gene family evolution
JB Procter, J Thompson, I Letunic, C Creevey, F Jossinet, GJ Barton
Nature methods 7 (Suppl 3), S16-S25, 2010
1182010
Visualization of biomedical data
SI O'Donoghue, BF Baldi, SJ Clark, AE Darling, JM Hogan, S Kaur, ...
Annual Review of Biomedical Data Science 1 (1), 275-304, 2018
992018
MACSIMS: multiple alignment of complete sequences information management system
JD Thompson, A Muller, A Waterhouse, J Procter, GJ Barton, F Plewniak, ...
BMC bioinformatics 7, 1-13, 2006
642006
Wurst: a protein threading server with a structural scoring function, sequence profiles and optimized substitution matrices
AE Torda, JB Procter, T Huber
Nucleic acids research 32 (suppl_2), W532-W535, 2004
622004
JABAWS 2.2 distributed web services for Bioinformatics: protein disorder, conservation and RNA secondary structure
PV Troshin, JB Procter, A Sherstnev, DL Barton, F Madeira, GJ Barton
Bioinformatics 34 (11), 1939-1940, 2018
402018
Functional analysis of the methylmalonyl‐CoA epimerase from Caenorhabditis elegans
J Kühnl, T Bobik, JB Procter, C Burmeister, J Höppner, I Wilde, K Lüersen, ...
The FEBS journal 272 (6), 1465-1477, 2005
382005
SARS‐CoV‐2 structural coverage map reveals viral protein assembly, mimicry, and hijacking mechanisms
SI O’Donoghue, A Schafferhans, N Sikta, C Stolte, S Kaur, BK Ho, ...
Molecular systems biology 17 (9), e10079, 2021
292021
Jalview: visualization and analysis of molecular sequences, alignments, and structures
A Waterhouse, J Procter, DA Martin, GJ Barton
BMC Bioinformatics 6, 1-1, 2005
242005
The Dundee resource for sequence analysis and structure prediction
SA MacGowan, F Madeira, T Britto‐Borges, M Warowny, A Drozdetskiy, ...
Protein Science 29 (1), 277-297, 2020
192020
SARS-CoV-2 structural coverage map reveals state changes that disrupt host immunity
SI O’Donoghue, A Schafferhans, N Sikta, C Stolte, S Kaur, BK Ho, ...
82020
Problem solving environments: Extending the role of visualization systems
H Wright, K Brodlie, J Wood, J Procter
Euro-Par 2000 Parallel Processing: 6th International Euro-Par Conference …, 2000
72000
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Articles 1–20