Jonathan P. Bollback

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John P. HuelsenbeckUniversity of California, BerkeleyVerified email at berkeley.edu
Rasmus NielsenUC Berkeley, University of CopenhagenVerified email at sund.ku.dk
Mato LagatorUniversity of ManchesterVerified email at manchester.ac.uk
Fredrik RonquistProfessor, Swedish Museum of Natural History, Dept. Bioinformatics and GeneticsVerified email at nrm.se
Calin C. GuetIST AustriaVerified email at ist.ac.at
M Thomas P GilbertUniversity of CopenhagenVerified email at sund.ku.dk
Eske WillerslevCentre for GeoGenetics, University of CopenhagenVerified email at snm.ku.dk
Frank PanitzNatural Resources Institute FinlandVerified email at mbg.au.dk
Hande Acar KiritUniversity of Oklahoma,USAVerified email at ou.edu
Paul P. GardnerUniversity of Otago, New ZealandVerified email at otago.ac.nz
Gasper TkacikProfessor, Deputy Dean of the Graduate School, Institute of Science and Technology AustriaVerified email at ist.ac.at
Michael J. BraunResearch Scientist, Vertebrate Zoology, Smithsonian InstitutionVerified email at si.edu
Lucy WeinertAssociate Professor, University of CambridgeVerified email at cam.ac.uk
Andrew RambautProfessor of Molecular Evolution, University of EdinburghVerified email at ed.ac.uk
José R PenadésProfessor of MicrobiologyVerified email at imperial.ac.uk
J. Ross FitzgeraldUniversity of EdinburghVerified email at ed.ac.uk
Dr Caitriona GuinaneMunster Technological UniversityVerified email at cit.ie
Maria Angeles Tormo-MasInstituto de Investigación Sanitaria La FeVerified email at iislafe.es
Richard WilkersonWalter Reed Biosystematics Unit and National Museum of Natural History, Smithsonian InstitutionVerified email at si.edu
Jan ConnResearch Scientist, Wadsworth Center, NYSDOH, Albany NYVerified email at health.ny.gov

Jonathan P. Bollback

Department of Evolution, Ecology, and Behaviour; University of Liverpool

Verified email at liverpool.ac.uk - Homepage

Epistasis Experimental Evolution Horizontal Gene Transfer Microbe Virus


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Bayesian inference of phylogeny and its impact on evolutionary biology JP Huelsenbeck, F Ronquist, R Nielsen, JP Bollback science 294 (5550), 2310-2314, 2001	3309	2001
SIMMAP: stochastic character mapping of discrete traits on phylogenies JP Bollback BMC bioinformatics 7, 1-7, 2006	924	2006
Stochastic mapping of morphological characters JP Huelsenbeck, R Nielsen, JP Bollback Systematic biology 52 (2), 131-158, 2003	923	2003
The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing J Binladen, MTP Gilbert, JP Bollback, F Panitz, C Bendixen, R Nielsen, ... PloS one 2 (2), e197, 2007	694	2007
Empirical and hierarchical Bayesian estimation of ancestral states JP Huelsenbeck, JP Bollback Systematic biology 50 (3), 351-366, 2001	414	2001
Bayesian model adequacy and choice in phylogenetics JP Bollback Molecular Biology and Evolution 19 (7), 1171-1180, 2002	274	2002
Inferring the root of a phylogenetic tree JP Huelsenbeck, JP Bollback, AM Levine Systematic biology 51 (1), 32-43, 2002	266	2002
Evolutionary Genomics of Staphylococcus aureus Reveals Insights into the Origin and Molecular Basis of Ruminant Host Adaptation CM Guinane, NL Ben Zakour, MA Tormo-Mas, LA Weinert, BV Lowder, ... Genome biology and evolution 2, 454-466, 2010	230	2010
Genes under positive selection in Escherichia coli L Petersen, JP Bollback, M Dimmic, M Hubisz, R Nielsen Genome research 17 (9), 1336-1343, 2007	198	2007
Estimation of 2N_es From Temporal Allele Frequency Data JP Bollback, TL York, R Nielsen Genetics 179 (1), 497-502, 2008	168	2008
Exploring genomic dark matter: a critical assessment of the performance of homology search methods on noncoding RNA EK Freyhult, JP Bollback, PP Gardner Genome research 17 (1), 117-125, 2007	158	2007
True and false gharials: a nuclear gene phylogeny of Crocodylia J Harshman, CJ Huddleston, JP Bollback, TJ Parsons, MJ Braun Systematic Biology 52 (3), 386-402, 2003	120	2003
Phylogeny, genome evolution, and host specificity of single-stranded RNA bacteriophage (family Leviviridae) JP Bollback, JP Huelsenbeck Journal of molecular evolution 52, 117-128, 2001	115	2001
Clonal interference is alleviated by high mutation rates in large populations JP Bollback, JP Huelsenbeck Molecular biology and evolution 24 (6), 1397-1406, 2007	82	2007
Parallel genetic evolution within and between bacteriophage species of varying degrees of divergence JP Bollback, JP Huelsenbeck Genetics 181 (1), 225-234, 2009	74	2009
Population structure of the malaria vector Anopheles darlingi in a malaria-endemic region of eastern Amazonian Brazil JE Conn, JH Vineis, JP Bollback, DY Onyabe, RC Wilkerson, MM Povoa American Journal of Tropical Medicine and Hygiene 74 (5), 798-806, 2006	70	2006
Application of the likelihood function in phylogenetic analysis JP Huelsenbeck, JP Bollback Handbook of statistical genetics, 2004	52	2004
Posterior mapping and posterior predictive distributions JP Bollback Statistical methods in molecular evolution, 439-462, 2005	43	2005
Gene amplification as a form of population-level gene expression regulation I Tomanek, R Grah, M Lagator, AMC Andersson, JP Bollback, G Tkačik, ... Nature ecology & evolution 4 (4), 612-625, 2020	37	2020
On the mechanistic nature of epistasis in a canonical cis-regulatory element M Lagator, T Paixao, NH Barton, JP Bollback, CC Guet Elife 6, e25192, 2017	34	2017

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