Jonathan P. Bollback

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John P. HuelsenbeckUniversity of California, BerkeleyVerified email at berkeley.edu
Rasmus NielsenUC Berkeley, University of CopenhagenVerified email at bio.ku.dk
Fredrik RonquistProfessor, Swedish Museum of Natural History, Dept. Bioinformatics and GeneticsVerified email at nrm.se
Mato LagatorUniversity of ManchesterVerified email at manchester.ac.uk
Calin C. GuetIST AustriaVerified email at ist.ac.at
M Thomas P GilbertUniversity of CopenhagenVerified email at sund.ku.dk
Eske WillerslevCentre for GeoGenetics, University of CopenhagenVerified email at snm.ku.dk
Frank PanitzAarhus UniversityVerified email at mbg.au.dk
Paul P. GardnerUniversity of Otago, New ZealandVerified email at otago.ac.nz
Michael J. BraunResearch Scientist, Vertebrate Zoology, Smithsonian InstitutionVerified email at si.edu
Richard WilkersonWalter Reed Biosystematics Unit and National Museum of Natural History, Smithsonian InstitutionVerified email at si.edu
Lucy WeinertHenry Dale Research Fellow, University of CambridgeVerified email at cam.ac.uk
Andrew RambautProfessor of Molecular Evolution, University of EdinburghVerified email at ed.ac.uk
José R PenadésProfessor of MicrobiologyVerified email at imperial.ac.uk
J. Ross FitzgeraldUniversity of EdinburghVerified email at ed.ac.uk
Dr Caitriona GuinaneMunster Technological UniversityVerified email at cit.ie
Matt DimmicGenomics & Data Science Lead, BayerVerified email at dimmic.net
Melissa HubiszCornell UniversityVerified email at cornell.edu
Anne KupczokBioinformatics Group, Wageningen University & ResearchVerified email at wur.nl
Thomas YorkBoyce Thompson InstituteVerified email at cornell.edu

Jonathan P. Bollback

Institute of Integrative Biology, University of Liverpool

Verified email at liverpool.ac.uk - Homepage

Epistasis Experimental Evolution Phylogenetics Microbe Virus


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Bayesian inference of phylogeny and its impact on evolutionary biology JP Huelsenbeck, F Ronquist, R Nielsen, JP Bollback science 294 (5550), 2310-2314, 2001	3045	2001
SIMMAP: stochastic character mapping of discrete traits on phylogenies JP Bollback BMC bioinformatics 7 (1), 1-7, 2006	755	2006
Stochastic mapping of morphological characters JP Huelsenbeck, R Nielsen, JP Bollback Systematic biology 52 (2), 131-158, 2003	754	2003
The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing J Binladen, MTP Gilbert, JP Bollback, F Panitz, C Bendixen, R Nielsen, ... PloS one 2 (2), e197, 2007	614	2007
Empirical and hierarchical Bayesian estimation of ancestral states JP Huelsenbeck, JP Bollback Systematic biology 50 (3), 351-366, 2001	394	2001
Inferring the root of a phylogenetic tree JP Huelsenbeck, JP Bollback, AM Levine Systematic biology 51 (1), 32-43, 2002	243	2002
Bayesian model adequacy and choice in phylogenetics JP Bollback Molecular Biology and Evolution 19 (7), 1171-1180, 2002	235	2002
Evolutionary genomics of Staphylococcus aureus reveals insights into the origin and molecular basis of ruminant host adaptation CM Guinane, NL Ben Zakour, MA Tormo-Mas, LA Weinert, BV Lowder, ... Genome biology and evolution 2, 454-466, 2010	202	2010
Genes under positive selection in Escherichia coli L Petersen, JP Bollback, M Dimmic, M Hubisz, R Nielsen Genome research 17 (9), 1336-1343, 2007	181	2007
Exploring genomic dark matter: a critical assessment of the performance of homology search methods on noncoding RNA EK Freyhult, JP Bollback, PP Gardner Genome research 17 (1), 117-125, 2007	150	2007
Estimation of 2N_es From Temporal Allele Frequency Data JP Bollback, TL York, R Nielsen Genetics 179 (1), 497-502, 2008	142	2008
True and false gharials: a nuclear gene phylogeny of Crocodylia J Harshman, CJ Huddleston, JP Bollback, TJ Parsons, MJ Braun Systematic Biology 52 (3), 386-402, 2003	110	2003
Phylogeny, genome evolution, and host specificity of single-stranded RNA bacteriophage (family Leviviridae) JP Bollback, JP Huelsenbeck Journal of molecular evolution 52 (2), 117-128, 2001	103	2001
Bayesian inference of phylogenetic trees JP Huelsenbeck, F Ronquist, R Nielsen, JP Bollback Bioinformatics 17 (8), 754-755, 2001	95	2001
Clonal interference is alleviated by high mutation rates in large populations JP Bollback, JP Huelsenbeck Molecular biology and evolution 24 (6), 1397-1406, 2007	81	2007
Parallel genetic evolution within and between bacteriophage species of varying degrees of divergence JP Bollback, JP Huelsenbeck Genetics 181 (1), 225-234, 2009	72	2009
Population structure of the malaria vector Anopheles darlingi in a malaria-endemic region of eastern Amazonian Brazil JE Conn, JH Vineis, JP Bollback, DY Onyabe, RC Wilkerson, MM Póvoa The American journal of tropical medicine and hygiene 74 (5), 798-806, 2006	67	2006
Application of the likelihood function in phylogenetic analysis JP Huelsenbeck, JP Bollback Handbook of statistical genetics, 2004	44	2004
Posterior mapping and posterior predictive distributions JP Bollback Statistical methods in molecular evolution, 439-462, 2005	39	2005
Fitness effects of beneficial mutations: the mutational landscape model in experimental evolution AJ Betancourt, JP Bollback Current opinion in genetics & development 16 (6), 618-623, 2006	28	2006

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