Dave Bouvier
Dave Bouvier
Computational Scientist, Pennsylvania State University
Verified email at bx.psu.edu - Homepage
Title
Cited by
Cited by
Year
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update
E Afgan, D Baker, M Van den Beek, D Blankenberg, D Bouvier, M Čech, ...
Nucleic acids research 44 (W1), W3-W10, 2016
33842016
Bioconda: sustainable and comprehensive software distribution for the life sciences
B Grüning, R Dale, A Sjödin, BA Chapman, J Rowe, CH Tomkins-Tinch, ...
Nature methods 15 (7), 475-476, 2018
4842018
Dissemination of scientific software with Galaxy ToolShed
D Blankenberg, G Von Kuster, E Bouvier, D Baker, E Afgan, N Stoler, ...
Genome biology 15 (2), 1-3, 2014
1982014
HyPhy 2.5—a customizable platform for evolutionary hypothesis testing using phylogenies
SL Kosakovsky Pond, AFY Poon, R Velazquez, S Weaver, NL Hepler, ...
Molecular biology and evolution 37 (1), 295-299, 2020
1032020
StructureFold: genome-wide RNA secondary structure mapping and reconstruction in vivo
Y Tang, E Bouvier, CK Kwok, Y Ding, A Nekrutenko, PC Bevilacqua, ...
Bioinformatics 31 (16), 2668-2675, 2015
492015
No more business as usual: Agile and effective responses to emerging pathogen threats require open data and open analytics
D Baker, M Van Den Beek, D Blankenberg, D Bouvier, J Chilton, N Coraor, ...
PLoS pathogens 16 (8), e1008643, 2020
172020
Using Galaxy to Perform Large‐Scale Interactive Data Analyses—An Update
A Ostrovsky, J Hillman‐Jackson, D Bouvier, D Clements, E Afgan, ...
Current Protocols 1 (2), e31, 2021
22021
Freely accessible ready to use global infrastructure for SARS-CoV-2 monitoring
W Maier, S Bray, M van den Beek, D Bouvier, N Coraor, M Miladi, B Singh, ...
bioRxiv, 2021
22021
Expanding the Galaxy’s reference data
N VijayKrishna, J Joshi, N Coraor, J Hillman-Jackson, D Bouvier, ...
bioRxiv, 2020
22020
Ready-to-use public infrastructure for global SARS-CoV-2 monitoring
W Maier, S Bray, M van den Beek, D Bouvier, N Coraor, M Miladi, B Singh, ...
Nature Biotechnology 39 (10), 1178-1179, 2021
12021
Galaxy planemo 0.35. 0
J Chilton, P Cock, E Rasche, N Turaga, M Cech, B Grüning, N Soranzo, ...
Zenodo, 2016
12016
Fast and accurate genome-wide predictions and structural modeling of protein-protein interactions using Galaxy.
A Guerler, D Baker, M van den Beek, B Gruening, D Bouvier, N Coraor, ...
BioRxiv, 2021
2021
Rapid molecular sequence characterization of the SARS-CoV-2 variant of interest Lambda (C. 37)
AG Lucaci, JD Zehr, SD Shank, S Weaver, D Bouvier, H Mei, ...
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