thomas carroll
thomas carroll
Head Of Bioinformatics, The Rockefeller University
Verified email at - Homepage
Cited by
Cited by
A complex secretory program orchestrated by the inflammasome controls paracrine senescence
JC Acosta, A Banito, T Wuestefeld, A Georgilis, P Janich, JP Morton, ...
Nature cell biology 15 (8), 978-990, 2013
Naive pluripotency is associated with global DNA hypomethylation
HG Leitch, KR McEwen, A Turp, V Encheva, T Carroll, N Grabole, ...
Nature structural & molecular biology 20 (3), 311, 2013
mTOR regulates MAPKAPK2 translation to control the senescence-associated secretory phenotype
N Herranz, S Gallage, M Mellone, T Wuestefeld, S Klotz, CJ Hanley, ...
Nature cell biology 17 (9), 1205-1217, 2015
Polycomb associates genome-wide with a specific RNA polymerase II variant, and regulates metabolic genes in ESCs
E Brookes, I de Santiago, D Hebenstreit, KJ Morris, T Carroll, SQ Xie, ...
Cell stem cell 10 (2), 157-170, 2012
A role for cohesin in T-cell-receptor rearrangement and thymocyte differentiation
VC Seitan, B Hao, K Tachibana-Konwalski, T Lavagnolli, ...
Nature 476 (7361), 467-471, 2011
Independence of repressive histone marks and chromatin compaction during senescent heterochromatic layer formation
T Chandra, K Kirschner, JY Thuret, BD Pope, T Ryba, S Newman, ...
Molecular cell 47 (2), 203-214, 2012
Functional variants at the 11q13 risk locus for breast cancer regulate cyclin D1 expression through long-range enhancers
JD French, M Ghoussaini, SL Edwards, KB Meyer, K Michailidou, ...
The American Journal of Human Genetics 92 (4), 489-503, 2013
Redistribution of the Lamin B1 genomic binding profile affects rearrangement of heterochromatic domains and SAHF formation during senescence
M Sadaie, R Salama, T Carroll, K Tomimatsu, T Chandra, ARJ Young, ...
Genes & development 27 (16), 1800-1808, 2013
MicroRNA regulation of Cbx7 mediates a switch of Polycomb orthologs during ESC differentiation
A O'Loghlen, AM Muñoz-Cabello, A Gaspar-Maia, HA Wu, A Banito, ...
Cell stem cell 10 (1), 33-46, 2012
The transcription corepressor LEUNIG interacts with the histone deacetylase HDA19 and mediator components MED14 (SWP) and CDK8 (HEN3) to repress transcription
D Gonzalez, AJ Bowen, TS Carroll, RS Conlan
Molecular and cellular biology 27 (15), 5306-5315, 2007
Impact of artifact removal on ChIP quality metrics in ChIP-seq and ChIP-exo data
TS Carroll, Z Liang, R Salama, R Stark, I de Santiago
Frontiers in genetics 5, 75, 2014
Epileptic seizure prediction using big data and deep learning: toward a mobile system
I Kiral-Kornek, S Roy, E Nurse, B Mashford, P Karoly, T Carroll, D Payne, ...
EBioMedicine 27, 103-111, 2018
Spatial enhancer clustering and regulation of enhancer-proximal genes by cohesin
E Ing-Simmons, VC Seitan, AJ Faure, P Flicek, T Carroll, J Dekker, ...
Genome research 25 (4), 504-513, 2015
The cytoplasmic DNA sensor cGAS promotes mitotic cell death
C Zierhut, N Yamaguchi, M Paredes, JD Luo, T Carroll, H Funabiki
Cell 178 (2), 302-315. e23, 2019
Reactive oxygen species regulate axonal regeneration through the release of exosomal NADPH oxidase 2 complexes into injured axons
A Hervera, F De Virgiliis, I Palmisano, L Zhou, E Tantardini, G Kong, ...
Nature cell biology 20 (3), 307-319, 2018
Genome-wide identification of Ikaros targets elucidates its contribution to mouse B-cell lineage specification and pre-B–cell differentiation
I Ferreirós-Vidal, T Carroll, B Taylor, A Terry, Z Liang, L Bruno, ...
Blood, The Journal of the American Society of Hematology 121 (10), 1769-1782, 2013
PTBP1-mediated alternative splicing regulates the inflammatory secretome and the pro-tumorigenic effects of senescent cells
A Georgilis, S Klotz, CJ Hanley, N Herranz, B Weirich, B Morancho, ...
Cancer Cell 34 (1), 85-102. e9, 2018
Elevated levels of FOXA1 facilitate androgen receptor chromatin binding resulting in a CRPC-like phenotype
JLL Robinson, TE Hickey, AY Warren, SL Vowler, T Carroll, AD Lamb, ...
Oncogene 33 (50), 5666-5674, 2014
5-hydroxymethylcytosine marks promoters in colon that resist DNA hypermethylation in cancer
S Uribe-Lewis, R Stark, T Carroll, MJ Dunning, M Bachman, Y Ito, L Stojic, ...
Genome biology 16 (1), 1-15, 2015
microRNA-mediated regulation of mTOR complex components facilitates discrimination between activation and anergy in CD4 T cells
A Marcais, R Blevins, J Graumann, A Feytout, G Dharmalingam, T Carroll, ...
Journal of Experimental Medicine 211 (11), 2281-2295, 2014
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