| Genome-scale proteomics reveals Arabidopsis thaliana gene models and proteome dynamics K Baerenfaller, J Grossmann, MA Grobei, R Hull, M Hirsch-Hoffmann, ... Science 320 (5878), 938-941, 2008 | 522 | 2008 |
| Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks S Reiland, G Messerli, K Baerenfaller, B Gerrits, A Endler, J Grossmann, ... Plant physiology 150 (2), 889-903, 2009 | 446 | 2009 |
| Systems‐based analysis of Arabidopsis leaf growth reveals adaptation to water deficit K Baerenfaller, C Massonnet, S Walsh, S Baginsky, P Bühlmann, ... Molecular systems biology 8 (1), 606, 2012 | 179 | 2012 |
| Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF) S Reiland, G Finazzi, A Endler, A Willig, K Baerenfaller, J Grossmann, ... Proceedings of the National Academy of Sciences 108 (31), 12955-12960, 2011 | 135 | 2011 |
| 5-Fluorouracil is efficiently removed from DNA by the base excision and mismatch repair systems F Fischer, K Baerenfaller, J Jiricny Gastroenterology 133 (6), 1858-1868, 2007 | 106 | 2007 |
| MASCP Gator: an aggregation portal for the visualization of Arabidopsis proteomics data HJ Joshi, M Hirsch-Hoffmann, K Baerenfaller, W Gruissem, S Baginsky, ... Plant physiology 155 (1), 259-270, 2011 | 92 | 2011 |
| Plastid proteome assembly without Toc159: photosynthetic protein import and accumulation of N-acetylated plastid precursor proteins S Bischof, K Baerenfaller, T Wildhaber, R Troesch, PA Vidi, B Roschitzki, ... The Plant cell 23 (11), 3911-3928, 2011 | 81 | 2011 |
| pep2pro: a new tool for comprehensive proteome data analysis to reveal information about organ-specific proteomes in Arabidopsis thaliana K Baerenfaller, M Hirsch-Hoffmann, J Svozil, R Hull, D Russenberger, ... Integrative biology 3 (3), 225-237, 2011 | 71 | 2011 |
| Global analysis of ribosome-associated noncoding RNAs unveils new modes of translational regulation J Bazin, K Baerenfaller, SJ Gosai, BD Gregory, M Crespi, J Bailey-Serres Proceedings of the National Academy of Sciences 114 (46), E10018-E10027, 2017 | 69 | 2017 |
| Jasmonate controls polypeptide patterning in undamaged tissue in wounded Arabidopsis leaves A Gfeller, K Baerenfaller, J Loscos, A Chételat, S Baginsky, EE Farmer Plant Physiology 156 (4), 1797-1807, 2011 | 68 | 2011 |
| Large-scale proteomics of the cassava storage root and identification of a target gene to reduce postharvest deterioration H Vanderschuren, E Nyaboga, JS Poon, K Baerenfaller, J Grossmann, ... The Plant Cell 26 (5), 1913-1924, 2014 | 60 | 2014 |
| A workflow to increase the detection rate of proteins from unsequenced organisms in high‐throughput proteomics experiments J Grossmann, B Fischer, K Baerenfaller, J Owiti, JM Buhmann, ... Proteomics 7 (23), 4245-4254, 2007 | 51 | 2007 |
| Taking the next step: building an Arabidopsis information portal International Arabidopsis Informatics Consortium The Plant Cell 24 (6), 2248-2256, 2012 | 36 | 2012 |
| pep2pro: the high-throughput proteomics data processing, analysis, and visualization tool M Hirsch-Hoffmann, W Gruissem, K Baerenfaller Frontiers in plant science 3, 123, 2012 | 28 | 2012 |
| Photoperiodic control of the Arabidopsis proteome reveals a translational coincidence mechanism DD Seaton, A Graf, K Baerenfaller, M Stitt, AJ Millar, W Gruissem Molecular systems biology 14 (3), e7962, 2018 | 27 | 2018 |
| Protein abundance changes and ubiquitylation targets identified after inhibition of the proteasome with syringolin A J Svozil, M Hirsch-Hoffmann, R Dudler, W Gruissem, K Baerenfaller Molecular & Cellular Proteomics 13 (6), 1523-1536, 2014 | 27 | 2014 |
| Common and specific protein accumulation patterns in different albino/pale-green mutants reveals regulon organization at the proteome level R Motohashi, A Rödiger, B Agne, K Baerenfaller, S Baginsky Plant physiology 160 (4), 2189-2201, 2012 | 26 | 2012 |
| Proteasome targeting of proteins in Arabidopsis leaf mesophyll, epidermal and vascular tissues J Svozil, W Gruissem, K Baerenfaller Frontiers in plant science 6, 376, 2015 | 24 | 2015 |
| Diurnal changes in the histone H3 signature H3K9ac|H3K27ac|H3S28p are associated with diurnal gene expression in Arabidopsis K Baerenfaller, H Shu, M Hirsch‐Hoffmann, J Fütterer, L Opitz, ... Plant, cell & environment 39 (11), 2557-2569, 2016 | 22 | 2016 |
| Integrated proteome and metabolite analysis of the de‐etiolation process in plastids from rice (Oryza sativa L.) S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes‐Nesi, ... Proteomics 11 (9), 1751-1763, 2011 | 21 | 2011 |
Jonas GrossmannSenior Proteome Informatic Expert, ETH Zurich, University of ZurichVerified email at fgcz.ethz.ch
