Using synthetic templates to design an unbiased multiplex PCR assay CS Carlson, RO Emerson, AM Sherwood, C Desmarais, MW Chung, ... Nature communications 4 (1), 2680, 2013 | 587 | 2013 |
Immunosequencing identifies signatures of cytomegalovirus exposure history and HLA-mediated effects on the T cell repertoire RO Emerson, WS DeWitt, M Vignali, J Gravley, JK Hu, EJ Osborne, ... Nature genetics 49 (5), 659-665, 2017 | 442 | 2017 |
Automated finishing with autofinish D Gordon, C Desmarais, P Green Genome research 11 (4), 614-625, 2001 | 440 | 2001 |
Common clonal origin of central and resident memory T cells following skin immunization O Gaide, RO Emerson, X Jiang, N Gulati, S Nizza, C Desmarais, H Robins, ... Nature medicine 21 (6), 647-653, 2015 | 302 | 2015 |
T cell repertoire following autologous stem cell transplantation for multiple sclerosis PA Muraro, H Robins, S Malhotra, M Howell, D Phippard, C Desmarais, ... The Journal of clinical investigation 124 (3), 1168-1172, 2014 | 271 | 2014 |
Ultra-sensitive detection of rare T cell clones H Robins, C Desmarais, J Matthis, R Livingston, J Andriesen, H Reijonen, ... Journal of immunological methods 375 (1-2), 14-19, 2012 | 226 | 2012 |
Intramuscular therapeutic vaccination targeting HPV16 induces T cell responses that localize in mucosal lesions L Maldonado, JE Teague, MP Morrow, I Jotova, TC Wu, C Wang, ... Science translational medicine 6 (221), 221ra13-221ra13, 2014 | 216 | 2014 |
IgH-V (D) J NGS-MRD measurement pre-and early post-allotransplant defines very low-and very high-risk ALL patients MA Pulsipher, C Carlson, B Langholz, DA Wall, KR Schultz, N Bunin, ... Blood, The Journal of the American Society of Hematology 125 (22), 3501-3508, 2015 | 214 | 2015 |
Deep sequencing of the human TCRγ and TCRβ repertoires suggests that TCRβ rearranges after αβ and γδ T cell commitment AM Sherwood, C Desmarais, RJ Livingston, J Andriesen, M Haussler, ... Science translational medicine 3 (90), 90ra61-90ra61, 2011 | 194 | 2011 |
Tumor-infiltrating lymphocytes in colorectal tumors display a diversity of T cell receptor sequences that differ from the T cells in adjacent mucosal tissue AM Sherwood, RO Emerson, D Scherer, N Habermann, K Buck, J Staffa, ... Cancer Immunology, Immunotherapy 62, 1453-1461, 2013 | 190 | 2013 |
CMV reactivation drives posttransplant T-cell reconstitution and results in defects in the underlying TCRβ repertoire Y Suessmuth, R Mukherjee, B Watkins, DT Koura, K Finstermeier, ... Blood, The Journal of the American Society of Hematology 125 (25), 3835-3850, 2015 | 178 | 2015 |
Dynamics of the cytotoxic T cell response to a model of acute viral infection WS DeWitt, RO Emerson, P Lindau, M Vignali, TM Snyder, C Desmarais, ... Journal of virology 89 (8), 4517-4526, 2015 | 156 | 2015 |
Regression of metastatic Merkel cell carcinoma following transfer of polyomavirus-specific T cells and therapies capable of reinducing HLA class-I AG Chapuis, OK Afanasiev, JG Iyer, KG Paulson, U Parvathaneni, ... Cancer immunology research 2 (1), 27-36, 2014 | 101 | 2014 |
Minimal residual disease monitoring with high-throughput sequencing of T cell receptors in cutaneous T cell lymphoma WK Weng, R Armstrong, S Arai, C Desmarais, R Hoppe, YH Kim Science translational medicine 5 (214), 214ra171-214ra171, 2013 | 98 | 2013 |
Polymorphisms of the IL1-Receptor Antagonist Gene (IL1RN) Are Associated With Multiple Markers of Systemic Inflammation AP Reiner, MM Wurfel, LA Lange, CS Carlson, AS Nord, CL Carty, ... Arteriosclerosis, thrombosis, and vascular biology 28 (7), 1407-1412, 2008 | 96 | 2008 |
The restricted DH gene reading frame usage in the expressed human antibody repertoire is selected based upon its amino acid content J Benichou, J Glanville, ETL Prak, R Azran, TC Kuo, J Pons, C Desmarais, ... The Journal of Immunology 190 (11), 5567-5577, 2013 | 76 | 2013 |
Tracking the fate and origin of clinically relevant adoptively transferred CD8+ T cells in vivo AG Chapuis, C Desmarais, R Emerson, TM Schmitt, KC Shibuya, IP Lai, ... Science immunology 2 (8), eaal2568, 2017 | 64 | 2017 |
Estimating the ratio of CD4+ to CD8+ T cells using high-throughput sequence data R Emerson, A Sherwood, C Desmarais, S Malhotra, D Phippard, ... Journal of immunological methods 391 (1-2), 14-21, 2013 | 64 | 2013 |
Fractal organization of the human T cell repertoire in health and after stem cell transplantation J Meier, C Roberts, K Avent, A Hazlett, J Berrie, K Payne, D Hamm, ... Biology of Blood and Marrow Transplantation 19 (3), 366-377, 2013 | 61 | 2013 |
Deep sequencing of the human TCR and TCR repertoires suggests that TCR rearranges after and T cell commitment AM Sherwood, C Desmarais, RJ Livingston, J Andriesen, M Haussler, ... Sci Transl Med 3 (90), 90ra61, 2011 | 49 | 2011 |