Follow
Benjamin A. Barad
Benjamin A. Barad
Other namesBenjamin Barad
Assistant Professor, OHSU
Verified email at ohsu.edu - Homepage
Title
Cited by
Cited by
Year
EMRinger: side chain–directed model and map validation for 3D cryo-electron microscopy
BA Barad, N Echols, RYR Wang, Y Cheng, F DiMaio, PD Adams, ...
Nature methods 12 (10), 943-946, 2015
7312015
Automated structure refinement of macromolecular assemblies from cryo-EM maps using Rosetta
RYR Wang, Y Song, BA Barad, Y Cheng, JS Fraser, F DiMaio
Elife 5, e17219, 2016
3902016
Cryo-EM model validation recommendations based on outcomes of the 2019 EMDataResource challenge
CL Lawson, A Kryshtafovych, PD Adams, PV Afonine, ML Baker, ...
Nature methods 18 (2), 156-164, 2021
79*2021
Determination of ubiquitin fitness landscapes under different chemical stresses in a classroom setting
D Mavor, K Barlow, S Thompson, BA Barad, AR Bonny, CL Cario, ...
Elife 5, e15802, 2016
782016
XFEL structures of the influenza M2 proton channel: Room temperature water networks and insights into proton conduction
JL Thomaston, RA Woldeyes, T Nakane, A Yamashita, T Tanaka, ...
Proceedings of the National Academy of Sciences 114 (51), 13357-13362, 2017
752017
Temperature-jump solution X-ray scattering reveals distinct motions in a dynamic enzyme
MC Thompson, BA Barad, AM Wolff, H Sun Cho, F Schotte, DMC Schwarz, ...
Nature chemistry 11 (11), 1058-1066, 2019
722019
Quantifying organellar ultrastructure in cryo-electron tomography using a surface morphometrics pipeline
BA Barad, M Medina, D Fuentes, RL Wiseman, DA Grotjahn
Journal of Cell Biology 222 (4), e202204093, 2023
22*2023
CellPAINT: turnkey illustration of molecular cell biology
A Gardner, L Autin, D Fuentes, M Maritan, BA Barad, M Medina, AJ Olson, ...
Frontiers in bioinformatics 1, 660936, 2021
202021
Synthetic essentiality of metabolic regulator PDHK1 in PTEN-deficient cells and cancers
N Chatterjee, E Pazarentzos, MK Mayekar, P Gui, DV Allegakoen, ...
Cell reports 28 (9), 2317-2330. e8, 2019
172019
Differences in the chitinolytic activity of mammalian chitinases on soluble and insoluble substrates
BA Barad, L Liu, RE Diaz, R Basilio, SJ Van Dyken, RM Locksley, ...
Protein Science 29 (4), 952-963, 2020
162020
Nanoscale details of mitochondrial constriction revealed by cryoelectron tomography
SK Mageswaran, DA Grotjahn, X Zeng, BA Barad, M Medina, MH Hoang, ...
Biophysical Journal 122 (18), 3768-3782, 2023
12*2023
Mapping protein dynamics at high spatial resolution with temperature-jump X-ray crystallography
AM Wolff, E Nango, ID Young, AS Brewster, M Kubo, T Nomura, ...
Nature Chemistry 15 (11), 1549-1558, 2023
112023
Overcoming resolution attenuation during tilted cryo-EM data collection
S Aiyer, PR Baldwin, SM Tan, Z Shan, J Oh, A Mehrani, ME Bowman, ...
Nature Communications 15 (1), 389, 2024
22024
Mutant Chitinase With Enhanced Expression and Activity
B Barad, J Fraser, S Van Dyken, R Locksley
US Patent App. 17/505,561, 2022
2022
Maximizing Interpretability from Complex Experiments in Structural Biology and Biochemistry
BA Barad
UCSF, 2019
2019
The system can't perform the operation now. Try again later.
Articles 1–15