| Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris Tabula Muris Consortium, ... Nature 562 (7727), 367-372, 2018 | 1051* | 2018 |
| Analysing high-throughput sequencing data in Python with HTSeq 2.0 GH Putri, S Anders, PT Pyl, JE Pimanda, F Zanini Bioinformatics 38 (10), 2943-2945, 2022 | 507 | 2022 |
| Population genomics of intrapatient HIV-1 evolution F Zanini, J Brodin, L Thebo, C Lanz, G Bratt, J Albert, RA Neher eLife 4, e11282, 2015 | 247 | 2015 |
| Establishment and stability of the latent HIV-1 DNA reservoir J Brodin, F Zanini, L Thebo, C Lanz, G Bratt, RA Neher, J Albert eLife 5, e18889, 2016 | 166 | 2016 |
| Single-cell transcriptional dynamics of flavivirus infection F Zanini, SY Pu, E Bekerman, S Einav, SR Quake eLife, 203331, 2018 | 157 | 2018 |
| Virus-inclusive single-cell RNA sequencing reveals the molecular signature of progression to severe dengue F Zanini, ML Robinson, D Croote, MK Sahoo, AM Sanz, E Ortiz-Lasso, ... Proceedings of the National Academy of Sciences 115 (52), E12363-E12369, 2018 | 156 | 2018 |
| Viscosity and diffusion: crowding and salt effects in protein solutions M Heinen, F Zanini, F Roosen-Runge, D Fedunová, F Zhang, M Hennig, ... Soft Matter 8 (5), 1404-1419, 2012 | 111 | 2012 |
| In vivo mutation rates and the landscape of fitness costs of HIV-1 F Zanini, V Puller, J Brodin, J Albert, RA Neher Virus Evolution 3 (1), 2017 | 103 | 2017 |
| Feasibility and biological rationale of repurposing sunitinib and erlotinib for dengue treatment SY Pu, F Xiao, S Schor, E Bekerman, F Zanini, R Barouch-Bentov, ... Antiviral research 155, 67-75, 2018 | 102 | 2018 |
| Protein cluster formation in aqueous solution in the presence of multivalent metal ions–a light scattering study D Soraruf, F Roosen-Runge, M Grimaldo, F Zanini, R Schweins, T Seydel, ... Soft Matter 10 (6), 894-902, 2014 | 77 | 2014 |
| Thalidomide mimics uridine binding to an aromatic cage in cereblon MD Hartmann, I Boichenko, M Coles, F Zanini, AN Lupas, BH Alvarez Journal of structural biology 188 (3), 225-232, 2014 | 70 | 2014 |
| FFPopSim: an efficient forward simulation package for the evolution of large populations F Zanini, RA Neher Bioinformatics 28 (24), 3332-3333, 2012 | 64 | 2012 |
| igraph for R: R interface of the igraph library for graph theory and network analysis G Csárdi, T Nepusz, K Müller, S Horvát, V Traag, F Zanini, D Noom Zenodo. Available online at: https://CRAN. R-project. org/package= igraph …, 2023 | 62 | 2023 |
| Quantifying Selection against Synonymous Mutations in HIV-1 env Evolution F Zanini, RA Neher Journal of virology 87 (21), 11843-11850, 2013 | 62 | 2013 |
| Hierarchical molecular dynamics of bovine serum albumin in concentrated aqueous solution below and above thermal denaturation M Grimaldo, F Roosen-Runge, M Hennig, F Zanini, F Zhang, N Jalarvo, ... Physical Chemistry Chemical Physics 17 (6), 4645-4655, 2015 | 60 | 2015 |
| Diverse homeostatic and immunomodulatory roles of immune cells in the developing mouse lung at single cell resolution R Domingo-Gonzalez, F Zanini, X Che, M Liu, RC Jones, MA Swift, ... Elife 9, e56890, 2020 | 56 | 2020 |
| Broadly neutralizing human antibodies against dengue virus identified by single B cell transcriptomics ND Durham, A Agrawal, E Waltari, D Croote, F Zanini, M Fouch, ... ELife 8, e52384, 2019 | 56 | 2019 |
| Error rates, PCR recombination, and sampling depth in HIV-1 whole genome deep sequencing F Zanini, J Brodin, J Albert, RA Neher Virus research 239, 106-114, 2017 | 50 | 2017 |
| RuvB-like ATPases Function in Chromatin Decondensation at the End of Mitosis A Magalska, AK Schellhaus, D Moreno-Andrés, F Zanini, A Schooley, ... Developmental Cell 31 (3), 305–318, 2014 | 48 | 2014 |
| Salt-induced universal slowing down of the short-time self-diffusion of a globular protein in aqueous solution M Grimaldo, F Roosen-Runge, M Hennig, F Zanini, F Zhang, M Zamponi, ... The journal of physical chemistry letters 6 (13), 2577-2582, 2015 | 42 | 2015 |
Stephen QuakeProfessor of Bioengineering and Applied Physics, Stanford UniversityVerified email at stanford.edu
